Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 801 to 825 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1568254
1568266
ACACTC
12
-
2
GTGTGA
C9E72_RS07895
1568024
1568212
+
Intergenic
230
NZ_CP028592.1
1573471
1573483
AAGACG
12
-
2
GTCTTC
C9E72_RS07925
1572721
1574259
-
Genic
776
NZ_CP028592.1
1573752
1573764
ACCTGC
12
-
2
AGGTGC
C9E72_RS07925
1572721
1574259
-
Genic
495
NZ_CP028592.1
1579016
1579028
AATCAG
12
+
2
TCAGAA
C9E72_RS07975
1577890
1579155
+
Genic
1126
NZ_CP028592.1
1580914
1580927
ACAGTC
13
+
2
CACAGT
C9E72_RS07980
1579225
1587609
+
Genic
1689
NZ_CP028592.1
1581248
1581260
AGCATC
12
-
2
TGCTGA
C9E72_RS07980
1579225
1587609
+
Genic
2023
NZ_CP028592.1
1582989
1583002
AAGGGT
13
+
2
GGTAAG
C9E72_RS07980
1579225
1587609
+
Genic
3764
NZ_CP028592.1
1584239
1584251
AGCGCC
12
-
2
TGGCGC
C9E72_RS07980
1579225
1587609
+
Genic
5014
NZ_CP028592.1
1588677
1588690
AAATAG
13
-
2
TCTATT
C9E72_RS07985
1587831
1588763
-
Genic
73
NZ_CP028592.1
1590476
1590489
AAAAAT
13
-
2
ATTTTT
C9E72_RS08000
1590207
1591238
-
Genic
749
NZ_CP028592.1
1590775
1590791
AATATC
16
+
2
TATCAA
C9E72_RS08000
1590207
1591238
-
Genic
447
NZ_CP028592.1
1592896
1592909
ACTGCG
13
+
2
ACTGCG
fadL
1591603
1592943
-
Genic
34
NZ_CP028592.1
1593425
1593437
AAGCAG
12
+
2
GCAGAA
C9E72_RS08010
1593315
1593599
+
Genic
110
NZ_CP028592.1
1593643
1593656
AAAAG
13
-
2
TTTTC
C9E72_RS08010
1593315
1593599
+
Intergenic
328
NZ_CP028592.1
1594748
1594760
AGCGCC
12
-
2
CGCTGG
fadI
1593779
1595089
+
Genic
969
NZ_CP028592.1
1597210
1597222
AACTGC
12
+
2
CAACTG
fadJ
1595089
1597233
+
Genic
2121
NZ_CP028592.1
1599976
1599988
AAGGCC
12
-
2
CTTGGC
C9E72_RS08035
1599212
1601851
+
Genic
764
NZ_CP028592.1
1600692
1600704
ACAGCG
12
+
2
CAGCGA
C9E72_RS08035
1599212
1601851
+
Genic
1480
NZ_CP028592.1
1603169
1603182
AAAGCT
13
-
2
AGCTTT
C9E72_RS08050
1603182
1603610
+
Genic
0
NZ_CP028592.1
1604560
1604572
AAATCC
12
-
2
ATTTGG
C9E72_RS08060
1604130
1604972
+
Genic
430
NZ_CP028592.1
1606322
1606334
AAGCGG
12
+
2
CGGAAG
prmB
1605860
1606792
+
Genic
462
NZ_CP028592.1
1607365
1607378
ACCCGG
13
+
2
CCCGGA
aroC
1606827
1607912
+
Genic
538
NZ_CP028592.1
1608834
1608846
ACCGCC
12
-
2
CGGTGG
C9E72_RS08085
1608740
1609549
+
Genic
94
NZ_CP028592.1
1610902
1610915
AATC
13
+
3
CAAT
mnmC
1610530
1612536
-
Genic
1621
NZ_CP028592.1
1612363
1612375
ACATCC
12
-
2
GGATGT
mnmC
1610530
1612536
-
Genic
161