Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1101 to 1125 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2128731
2128756
ACAGAT
25
+
4
ACAGAT
C9E72_RS10810
2128276
2129319
+
Genic
455
NZ_CP028592.1
2128952
2128965
AGCCTG
13
+
2
GCCTGA
C9E72_RS10810
2128276
2129319
+
Genic
676
NZ_CP028592.1
2133578
2133590
AGCGCC
12
-
2
TGGCGC
C9E72_RS10870
2133349
2134398
+
Genic
229
NZ_CP028592.1
2134217
2134229
ACCATG
12
-
2
TGGTCA
C9E72_RS10870
2133349
2134398
+
Genic
868
NZ_CP028592.1
2138757
2138771
ACGCTG
14
+
2
CGCTGA
C9E72_RS10915
2136996
2138846
+
Genic
1761
NZ_CP028592.1
2138972
2138984
AAGCAG
12
-
2
TTCTGC
C9E72_RS10920
2138928
2140141
-
Genic
1157
NZ_CP028592.1
2140726
2140739
AACAGT
13
-
2
TTACTG
C9E72_RS10930
2140672
2141016
+
Genic
54
NZ_CP028592.1
2143121
2143133
AAAAG
12
+
2
AGAAA
C9E72_RS10960
2143022
2143336
+
Genic
99
NZ_CP028592.1
2143999
2144011
AATCAC
12
-
2
TTGTGA
C9E72_RS10970
2144037
2144546
+
Intergenic
-26
NZ_CP028592.1
2144141
2144153
AGATCC
12
-
2
CTGGAT
C9E72_RS10970
2144037
2144546
+
Genic
104
NZ_CP028592.1
2150607
2150619
AGGGGC
12
+
2
GGGCAG
C9E72_RS11005
2150410
2151150
+
Genic
197
NZ_CP028592.1
2156122
2156134
ACAGGG
12
-
2
TGTCCC
C9E72_RS11035
2155630
2156373
+
Genic
492
NZ_CP028592.1
2156552
2156564
AGCCGG
12
+
2
GCCGGA
C9E72_RS11040
2156319
2156951
+
Genic
233
NZ_CP028592.1
2157342
2157354
ACACGG
12
+
2
ACGGAC
C9E72_RS11040
2156319
2156951
+
Intergenic
1023
NZ_CP028592.1
2157398
2157411
AGCAGG
13
+
2
GGAGCA
C9E72_RS11040
2156319
2156951
+
Intergenic
1079
NZ_CP028592.1
2160546
2160558
ACACTG
12
+
2
CTGACA
C9E72_RS11055
2158153
2160666
+
Genic
2393
NZ_CP028592.1
2160649
2160662
ACTGAT
13
-
2
GTATCA
C9E72_RS11055
2158153
2160666
+
Genic
2496
NZ_CP028592.1
2161920
2161934
ACGAGG
14
-
2
CGTCCT
C9E72_RS11065
2161398
2162567
+
Genic
522
NZ_CP028592.1
2166392
2166404
ACCGCC
12
-
2
GGTGGC
C9E72_RS11090
2166092
2166622
-
Genic
218
NZ_CP028592.1
2167349
2167361
AAAACT
12
-
2
GTTTTA
zinT
2166965
2167636
-
Genic
275
NZ_CP028592.1
2169332
2169344
CCCCCG
12
-
2
GGCGGG
msrP
2168508
2169512
-
Genic
168
NZ_CP028592.1
2172875
2172887
AATTCG
12
+
2
TTCGAA
hchA
2172303
2173154
-
Genic
267
NZ_CP028592.1
2174073
2174085
AGCATC
12
+
2
GCATCA
hchA
2172303
2173154
-
Intergenic
-919
NZ_CP028592.1
2174293
2174307
AAAGTC
14
+
2
CAAAGT
hchA
2172303
2173154
-
Intergenic
-1139
NZ_CP028592.1
2175115
2175127
AAATAT
12
+
2
TAAATA
C9E72_RS11145
2175907
2176602
+
Intergenic
-780