Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1126 to 1150 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2175360
2175373
AATC
13
-
3
ATTG
C9E72_RS11145
2175907
2176602
+
Intergenic
-534
NZ_CP028592.1
2180140
2180152
ACCAGC
12
-
2
GGTGCT
C9E72_RS11165
2179620
2180537
+
Genic
520
NZ_CP028592.1
2180764
2180776
AGGGG
12
+
2
AGGGG
C9E72_RS11170
2180616
2180798
+
Genic
148
NZ_CP028592.1
2183901
2183913
AAAGCG
12
-
2
TTCGCT
yodD
2183773
2184000
-
Genic
87
NZ_CP028592.1
2183939
2183952
ACATCG
13
+
2
CATCGA
yodD
2183773
2184000
-
Genic
48
NZ_CP028592.1
2185176
2185190
AAAGT
14
+
2
TAAAG
fliR
2185308
2186093
-
Intergenic
903
NZ_CP028592.1
2185814
2185826
AAAGGC
12
+
2
GGCAAA
fliR
2185308
2186093
-
Genic
267
NZ_CP028592.1
2188115
2188127
AGCTCC
12
+
2
CCAGCT
fliM
2187895
2188899
-
Genic
772
NZ_CP028592.1
2195528
2195543
AGGCGC
15
+
2
CAGGCG
fliF
2194161
2195819
-
Genic
276
NZ_CP028592.1
2196091
2196103
ACGCGC
12
-
2
GTGCGC
fliE
2196034
2196348
+
Genic
57
NZ_CP028592.1
2202102
2202114
AGCCC
12
+
2
GCCCA
yedE
2201529
2202734
-
Genic
620
NZ_CP028592.1
2206066
2206079
AACTGG
13
-
2
TCCAGT
fliD
2205733
2207130
-
Genic
1051
NZ_CP028592.1
2206380
2206393
AACCTG
13
-
2
GTTCAG
fliD
2205733
2207130
-
Genic
737
NZ_CP028592.1
2206822
2206834
AGGCGC
12
-
2
TGCGCC
fliD
2205733
2207130
-
Genic
296
NZ_CP028592.1
2210788
2210801
AAGAAT
13
+
2
AATAAG
fliZ
2210238
2210789
+
Genic
550
NZ_CP028592.1
2219513
2219525
AAATAC
12
-
2
GTATTT
C9E72_RS11425
2219360
2219446
+
Intergenic
153
NZ_CP028592.1
2223671
2223683
AAGCCC
12
-
2
GCTTGG
C9E72_RS11455
2223175
2223687
+
Genic
496
NZ_CP028592.1
2228324
2228336
AAAAAG
12
-
2
CTTTTT
C9E72_RS11485
2228335
2228751
-
Genic
415
NZ_CP028592.1
2228550
2228562
AAGCAG
12
-
2
TTCTGC
C9E72_RS11485
2228335
2228751
-
Genic
189
NZ_CP028592.1
2232496
2232509
AACTGG
13
+
2
GAACTG
C9E72_RS11510
2231312
2234134
-
Genic
1625
NZ_CP028592.1
2237628
2237640
AATATC
12
-
2
ATTGAT
C9E72_RS11565
2237452
2237655
-
Genic
15
NZ_CP028592.1
2237985
2237997
AAAGGG
12
+
2
GGAAAG
C9E72_RS11575
2237954
2238358
+
Genic
31
NZ_CP028592.1
2239564
2239577
AACCAG
13
-
2
TGGTTC
C9E72_RS11590
2239407
2240408
+
Genic
157
NZ_CP028592.1
2244143
2244155
AATCAG
12
+
2
TCAGAA
C9E72_RS11615
2243839
2244162
-
Genic
7
NZ_CP028592.1
2245729
2245741
AAATTC
12
-
2
TGAATT
C9E72_RS11630
2244956
2245459
-
Intergenic
-270