Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1151 to 1175 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2247002
2247016
ACCGAT
14
-
2
ATCGGT
C9E72_RS11635
2246256
2247245
+
Genic
746
NZ_CP028592.1
2250158
2250170
AATGCC
12
-
2
GCATTG
otsB
2249997
2250797
+
Genic
161
NZ_CP028592.1
2251914
2251926
AACAAG
12
-
2
GTTCTT
otsA
2250772
2252196
+
Genic
1142
NZ_CP028592.1
2252291
2252304
AATCAC
13
-
2
TGTGAT
uspC
2252203
2252631
-
Genic
327
NZ_CP028592.1
2255490
2255503
AGATGG
13
-
2
ATCTCC
C9E72_RS11680
2255353
2256279
+
Genic
137
NZ_CP028592.1
2260285
2260298
ATCGGC
13
+
2
GCATCG
tar
2258915
2260576
+
Genic
1370
NZ_CP028592.1
2268399
2268411
CCCCCG
12
-
2
GGGCGG
flhA
2266556
2268634
+
Genic
1843
NZ_CP028592.1
2269654
2269666
AACGGT
12
-
2
ACCGTT
C9E72_RS11740
2269146
2269634
-
Intergenic
-20
NZ_CP028592.1
2277205
2277217
AAGACG
12
-
2
GTCTTC
C9E72_RS11770
2276455
2277993
-
Genic
776
NZ_CP028592.1
2277486
2277498
ACCTGC
12
-
2
AGGTGC
C9E72_RS11770
2276455
2277993
-
Genic
495
NZ_CP028592.1
2279840
2279852
AGCGCC
12
+
2
CAGCGC
cmoB
2279643
2280614
-
Genic
762
NZ_CP028592.1
2285261
2285273
AGCTC
12
-
2
GCTGA
aspS
2283534
2285306
+
Genic
1727
NZ_CP028592.1
2286215
2286227
AACCGC
12
+
2
CAACCG
C9E72_RS11825
2285905
2286645
+
Genic
310
NZ_CP028592.1
2291214
2291226
AAGCGT
12
+
2
GCGTAA
znuC
2290738
2291493
-
Genic
267
NZ_CP028592.1
2291931
2291943
ATC
12
-
4
GAT
znuA
2291572
2292504
+
Genic
359
NZ_CP028592.1
2299908
2299920
AATGG
12
+
2
ATGGA
edd
2299551
2301362
+
Genic
357
NZ_CP028592.1
2300322
2300335
AGCGGC
13
-
2
CCGCTG
edd
2299551
2301362
+
Genic
771
NZ_CP028592.1
2300357
2300370
AATGGT
13
+
2
GGTAAT
edd
2299551
2301362
+
Genic
806
NZ_CP028592.1
2302880
2302892
AAGTGG
12
+
2
AAGTGG
purT
2302096
2303274
-
Genic
382
NZ_CP028592.1
2302892
2302904
AGCTGC
12
+
2
GCAGCT
purT
2302096
2303274
-
Genic
370
NZ_CP028592.1
2304395
2304408
AGGATG
13
-
2
CATCCT
C9E72_RS11920
2304448
2305107
+
Intergenic
-40
NZ_CP028592.1
2304977
2304989
AATATC
12
-
2
TATTGA
C9E72_RS11920
2304448
2305107
+
Genic
529
NZ_CP028592.1
2305559
2305572
ACCGCT
13
+
2
GCTACC
ptrB
2305316
2307376
+
Genic
243
NZ_CP028592.1
2306486
2306498
ATATCC
12
-
2
TGGATA
ptrB
2305316
2307376
+
Genic
1170
NZ_CP028592.1
2308305
2308317
ATATCC
12
+
2
TCCATA
C9E72_RS11935
2308059
2308715
-
Genic
398