Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1176 to 1200 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2311828
2311840
AATTGC
12
+
2
TGCAAT
pphA
2311186
2311842
+
Genic
642
NZ_CP028592.1
2315531
2315543
ATCGCC
12
+
2
TCGCCA
C9E72_RS11980
2314013
2316646
-
Genic
1103
NZ_CP028592.1
2316225
2316239
AAAGGT
14
-
2
CTTTAC
C9E72_RS11980
2314013
2316646
-
Genic
407
NZ_CP028592.1
2318426
2318438
ACGAGG
12
+
2
GACGAG
C9E72_RS11990
2318028
2318525
+
Genic
398
NZ_CP028592.1
2319051
2319063
ACGCC
12
+
2
CCACG
proQ
2318622
2319320
+
Genic
429
NZ_CP028592.1
2319255
2319267
ACGCGG
12
-
2
GCGTCC
proQ
2318622
2319320
+
Genic
633
NZ_CP028592.1
2320944
2320957
AAACGG
13
+
2
GAAACG
C9E72_RS12000
2319340
2321388
+
Genic
1604
NZ_CP028592.1
2322637
2322649
CCGCG
12
+
2
GCGCC
C9E72_RS12010
2322507
2323880
-
Genic
1231
NZ_CP028592.1
2323661
2323673
AAAACG
12
+
2
AAACGA
C9E72_RS12010
2322507
2323880
-
Genic
207
NZ_CP028592.1
2324267
2324279
ACCCTG
12
+
2
CCCTGA
kdgR
2324057
2324848
+
Genic
210
NZ_CP028592.1
2324518
2324530
ATCGCG
12
+
2
CGCGAT
kdgR
2324057
2324848
+
Genic
461
NZ_CP028592.1
2326601
2326614
AACGTC
13
-
2
ACGTTG
C9E72_RS12035
2326565
2326708
+
Genic
36
NZ_CP028592.1
2327934
2327946
ATCGGC
12
-
2
GCCGAT
mntP
2327902
2328468
-
Genic
522
NZ_CP028592.1
2328175
2328189
AAGATG
14
-
2
TCTTCA
mntP
2327902
2328468
-
Genic
279
NZ_CP028592.1
2332811
2332823
AAGGAG
12
-
2
TTCTCC
C9E72_RS12075
2332572
2334128
+
Genic
239
NZ_CP028592.1
2333180
2333192
AAACCG
12
-
2
GGTTTC
C9E72_RS12075
2332572
2334128
+
Genic
608
NZ_CP028592.1
2333381
2333398
ATCGGC
17
-
2
CCGATG
C9E72_RS12075
2332572
2334128
+
Genic
809
NZ_CP028592.1
2333947
2333959
ACGATG
12
+
2
CGATGA
C9E72_RS12075
2332572
2334128
+
Genic
1375
NZ_CP028592.1
2343508
2343520
ACCGCC
12
-
2
CGGTGG
tsaB
2342890
2343585
+
Genic
618
NZ_CP028592.1
2344218
2344231
AAAAAG
13
+
2
AAAGAA
yeaY
2343625
2344206
+
Intergenic
593
NZ_CP028592.1
2348428
2348441
ACCGCT
13
+
2
CCGCTA
yeaW
2348368
2349492
-
Genic
1051
NZ_CP028592.1
2349690
2349702
AAGGG
12
+
2
GGAAG
yeaV
2349524
2351134
-
Genic
1432
NZ_CP028592.1
2350853
2350866
AAACAT
13
+
2
ATAAAC
yeaV
2349524
2351134
-
Genic
268
NZ_CP028592.1
2362165
2362177
AATCAG
12
-
2
TCTGAT
C9E72_RS12235
2360850
2362340
-
Genic
163
NZ_CP028592.1
2362458
2362470
AATAGT
12
+
2
GTAATA
C9E72_RS12240
2362521
2363996
-
Intergenic
1526