Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1701 to 1725 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3375089
3375101
AAAAAC
12
-
2
TTTTTG
dinI
3374834
3375079
+
Intergenic
255
NZ_CP028592.1
3375622
3375634
ACATG
12
+
2
ACATG
bssS
3375369
3375623
+
Genic
253
NZ_CP028592.1
3377178
3377191
AAAAAT
13
+
2
AAATAA
C9E72_RS17890
3377278
3377844
+
Intergenic
-87
NZ_CP028592.1
3382659
3382671
AGGGGC
12
-
2
TGCCCC
C9E72_RS17920
3382518
3382745
-
Genic
74
NZ_CP028592.1
3383884
3383896
AGCGG
12
+
2
AGCGG
mdoH
3382918
3385461
-
Genic
1565
NZ_CP028592.1
3384505
3384519
CCG
14
-
4
CGG
mdoH
3382918
3385461
-
Genic
942
NZ_CP028592.1
3385548
3385561
AAAGTG
13
-
2
CTTTCA
mdoG
3385454
3386989
-
Genic
1428
NZ_CP028592.1
3391786
3391798
ACCGCC
12
+
2
ACCGCC
csgA
3391421
3391879
-
Genic
81
NZ_CP028592.1
3396414
3396426
AAGCGG
12
-
2
CTTCCG
C9E72_RS17995
3396131
3396685
-
Genic
259
NZ_CP028592.1
3406367
3406379
ACGGCG
12
+
2
CGACGG
C9E72_RS18075
3405971
3408355
-
Genic
1976
NZ_CP028592.1
3407427
3407439
ACCATC
12
+
2
CACCAT
C9E72_RS18075
3405971
3408355
-
Genic
916
NZ_CP028592.1
3408644
3408656
AGCCGC
12
-
2
CGGCTG
ag43
3408466
3411315
-
Genic
2659
NZ_CP028592.1
3408984
3408998
AGCCCC
14
+
2
CCAGCC
ag43
3408466
3411315
-
Genic
2317
NZ_CP028592.1
3413492
3413504
AAGTGG
12
+
2
AGTGGA
C9E72_RS18105
3413370
3413795
-
Genic
291
NZ_CP028592.1
3414040
3414052
AAGCAG
12
+
2
GCAGAA
C9E72_RS18105
3413370
3413795
-
Intergenic
-245
NZ_CP028592.1
3415887
3415899
AAACCG
12
+
2
GAAACC
C9E72_RS18130
3415576
3416034
+
Genic
311
NZ_CP028592.1
3416145
3416157
AAAAAT
12
+
2
AAAAAT
C9E72_RS18130
3415576
3416034
+
Intergenic
569
NZ_CP028592.1
3416276
3416288
AAATGG
12
-
2
TTCCAT
C9E72_RS18130
3415576
3416034
+
Intergenic
700
NZ_CP028592.1
3416849
3416862
AATCTG
13
+
2
AATCTG
C9E72_RS18145
3417388
3418512
-
Intergenic
1650
NZ_CP028592.1
3426830
3426842
AAATCC
12
+
2
CCAAAT
C9E72_RS18205
3426814
3427200
-
Genic
358
NZ_CP028592.1
3427341
3427355
AAATTC
14
-
2
TTGAAT
C9E72_RS18205
3426814
3427200
-
Intergenic
-141
NZ_CP028592.1
3427790
3427802
AACGAC
12
-
2
CGTTGT
C9E72_RS18215
3427624
3428199
-
Genic
397
NZ_CP028592.1
3427937
3427950
ACGGCG
13
-
2
CGTCGC
C9E72_RS18215
3427624
3428199
-
Genic
249
NZ_CP028592.1
3430149
3430161
AAATCG
12
+
2
ATCGAA
C9E72_RS18230
3429958
3430413
-
Genic
252
NZ_CP028592.1
3430327
3430339
AAAAAC
12
-
2
TTTTTG
C9E72_RS18230
3429958
3430413
-
Genic
74