Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1726 to 1750 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3431897
3431910
ACCGTC
13
+
2
CGTCAC
C9E72_RS18240
3431593
3432174
-
Genic
264
NZ_CP028592.1
3437524
3437537
AACCTG
13
-
2
GGTTCA
C9E72_RS18270
3437521
3438729
+
Genic
3
NZ_CP028592.1
3441315
3441327
AGGCGG
12
-
2
TCCGCC
C9E72_RS18295
3441075
3442688
-
Genic
1361
NZ_CP028592.1
3442119
3442131
AGCGCC
12
-
2
GGCGCT
C9E72_RS18295
3441075
3442688
-
Genic
557
NZ_CP028592.1
3442882
3442895
AGCATC
13
+
2
CATCAG
tnpB
3442719
3443069
-
Genic
174
NZ_CP028592.1
3443271
3443283
AGCGCC
12
+
2
CGCCAG
C9E72_RS18305
3443066
3443491
-
Genic
208
NZ_CP028592.1
3449866
3449879
ACGCCG
13
+
2
CGCCGA
ureG
3449289
3449906
-
Genic
27
NZ_CP028592.1
3450720
3450732
ACGATC
12
-
2
CGTGAT
ureE
3450593
3451057
-
Genic
325
NZ_CP028592.1
3451276
3451288
AGC
12
-
4
TGC
ureC
3451067
3452770
-
Genic
1482
NZ_CP028592.1
3454954
3454967
AACTTC
13
-
2
TGAAGT
C9E72_RS18400
3455064
3456683
+
Intergenic
-97
NZ_CP028592.1
3455086
3455098
AAAAG
12
-
2
TTTTC
C9E72_RS18400
3455064
3456683
+
Genic
22
NZ_CP028592.1
3457185
3457197
AACATT
12
+
2
TTAACA
C9E72_RS18405
3456776
3457135
-
Intergenic
-50
NZ_CP028592.1
3457571
3457583
AAGCAG
12
-
2
TTCTGC
C9E72_RS18415
3457527
3458740
-
Genic
1157
NZ_CP028592.1
3459942
3459955
AACCAG
13
-
2
CTGGTT
C9E72_RS18435
3459747
3460352
-
Genic
397
NZ_CP028592.1
3463012
3463024
ACCTGC
12
+
2
GCACCT
C9E72_RS18460
3462518
3464056
+
Genic
494
NZ_CP028592.1
3463293
3463305
AAGACG
12
+
2
GAAGAC
C9E72_RS18460
3462518
3464056
+
Genic
775
NZ_CP028592.1
3465645
3465657
AATATC
12
+
2
CAATAT
C9E72_RS18470
3464813
3467173
-
Genic
1516
NZ_CP028592.1
3468522
3468534
ACCTC
12
+
2
CACCT
C9E72_RS18485
3468712
3470097
-
Intergenic
1563
NZ_CP028592.1
3469737
3469749
AAAAAC
12
-
2
TTTTTG
C9E72_RS18485
3468712
3470097
-
Genic
348
NZ_CP028592.1
3473090
3473102
AAAGAT
12
-
2
TTTATC
C9E72_RS18510
3472148
3473965
+
Genic
942
NZ_CP028592.1
3482008
3482020
ATCGCC
12
-
2
TGGCGA
C9E72_RS18550
3481791
3482498
-
Genic
478
NZ_CP028592.1
3483393
3483406
AAAAAT
13
+
2
ATAAAA
C9E72_RS18555
3482509
3483462
-
Genic
56
NZ_CP028592.1
3485771
3485783
AAACGG
12
-
2
TTTCCG
C9E72_RS18565
3484687
3487245
-
Genic
1462
NZ_CP028592.1
3486561
3486573
AGCGCC
12
+
2
AGCGCC
C9E72_RS18565
3484687
3487245
-
Genic
672
NZ_CP028592.1
3490543
3490555
AAAATT
12
+
2
AAAATT
C9E72_RS18595
3490529
3492148
-
Genic
1593