Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1751 to 1775 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3492495
3492507
AACAGC
12
-
2
CTGTTG
C9E72_RS18600
3492237
3496049
-
Genic
3542
NZ_CP028592.1
3496622
3496634
AAAGCC
12
-
2
GCTTTG
C9E72_RS18600
3492237
3496049
-
Intergenic
-573
NZ_CP028592.1
3498729
3498741
ACATGG
12
+
2
CATGGA
C9E72_RS18615
3498752
3499453
+
Intergenic
-11
NZ_CP028592.1
3498789
3498803
AGCATG
14
+
2
CATGAG
C9E72_RS18615
3498752
3499453
+
Genic
37
NZ_CP028592.1
3501203
3501215
AATGAG
12
-
2
TCATTC
C9E72_RS18620
3499506
3502028
+
Genic
1697
NZ_CP028592.1
3506374
3506387
AAATGT
13
-
2
TTACAT
C9E72_RS18640
3505680
3506492
+
Genic
694
NZ_CP028592.1
3508241
3508253
AAAAAT
12
-
2
TTTATT
C9E72_RS18650
3507090
3508700
-
Genic
447
NZ_CP028592.1
3509236
3509248
AGCATC
12
-
2
GCTGAT
C9E72_RS18655
3508798
3510156
-
Genic
908
NZ_CP028592.1
3509678
3509690
AAAAAC
12
+
2
CAAAAA
C9E72_RS18655
3508798
3510156
-
Genic
466
NZ_CP028592.1
3510082
3510094
AAAACC
12
+
2
ACCAAA
C9E72_RS18655
3508798
3510156
-
Genic
62
NZ_CP028592.1
3511474
3511486
AAAGTG
12
+
2
AGTGAA
pgaA
3510743
3513166
+
Genic
731
NZ_CP028592.1
3515950
3515962
AATATC
12
-
2
GATATT
pgaC
3515186
3516511
+
Genic
764
NZ_CP028592.1
3518687
3518699
AAGGG
12
-
2
CCCTT
efeB
3518384
3519655
-
Genic
956
NZ_CP028592.1
3518723
3518736
AGCATG
13
-
2
TCATGC
efeB
3518384
3519655
-
Genic
919
NZ_CP028592.1
3519574
3519589
AGCGCC
15
+
2
CGCCAG
efeB
3518384
3519655
-
Genic
66
NZ_CP028592.1
3523746
3523759
AAAGGT
13
+
2
AGGTAA
C9E72_RS18700
3522858
3524201
+
Genic
888
NZ_CP028592.1
3526312
3526324
ACGCG
12
+
2
CGACG
putA
3526281
3530243
+
Genic
31
NZ_CP028592.1
3527550
3527562
ACGGCG
12
-
2
GCCGTC
putA
3526281
3530243
+
Genic
1269
NZ_CP028592.1
3530199
3530211
AGCGGC
12
-
2
CCGCTG
putA
3526281
3530243
+
Genic
3918
NZ_CP028592.1
3531329
3531341
AAATCG
12
-
2
ATTTCG
rutA
3531209
3532300
+
Genic
120
NZ_CP028592.1
3539004
3539016
AGGCAT
12
+
2
GGCATA
C9E72_RS18780
3538096
3539337
-
Genic
321
NZ_CP028592.1
3540255
3540267
ATCGCC
12
+
2
GCCATC
cbpA
3541145
3542065
+
Intergenic
-878
NZ_CP028592.1
3540645
3540657
AATGAT
12
-
2
ATCATT
cbpA
3541145
3542065
+
Intergenic
-488
NZ_CP028592.1
3544759
3544772
AGCGCC
13
+
2
GCGCCA
torC
3545674
3546846
-
Intergenic
2074
NZ_CP028592.1
3546987
3546999
AACAAT
12
-
2
ATTGTT
torR
3546976
3547668
+
Genic
11