Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1801 to 1825 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3598517
3598530
AGCTCC
13
-
2
GAGCTG
C9E72_RS19120
3598612
3598797
+
Intergenic
-82
NZ_CP028592.1
3599424
3599436
AAAAG
12
+
2
AGAAA
C9E72_RS19125
3599325
3599639
+
Genic
99
NZ_CP028592.1
3599888
3599900
AAGCAG
12
-
2
TTCTGC
C9E72_RS19135
3599844
3601057
-
Genic
1157
NZ_CP028592.1
3601307
3601321
ACGCTG
14
-
2
CGTCAG
C9E72_RS19140
3601233
3603083
-
Genic
1762
NZ_CP028592.1
3605972
3605985
ACAGTG
13
+
2
TGACAG
C9E72_RS19175
3605184
3606002
-
Genic
17
NZ_CP028592.1
3606159
3606171
ATATCC
12
+
2
CATATC
C9E72_RS19180
3606154
3606525
-
Genic
354
NZ_CP028592.1
3607067
3607079
ACCATG
12
+
2
TGACCA
C9E72_RS19190
3606899
3607948
-
Genic
869
NZ_CP028592.1
3612828
3612842
AACAGG
14
-
2
TCCTGT
C9E72_RS19240
3612255
3613346
-
Genic
504
NZ_CP028592.1
3612845
3612857
AGCAGG
12
-
2
CTCCTG
C9E72_RS19240
3612255
3613346
-
Genic
489
NZ_CP028592.1
3612852
3612866
AACAGG
14
-
2
TCCTGT
C9E72_RS19240
3612255
3613346
-
Genic
480
NZ_CP028592.1
3616975
3616987
ACTGAT
12
+
2
ACTGAT
C9E72_RS19290
3616935
3617120
-
Genic
133
NZ_CP028592.1
3618265
3618277
ACGCGC
12
+
2
CGCGCA
C9E72_RS19310
3618164
3620635
+
Genic
101
NZ_CP028592.1
3618456
3618468
ATCCG
12
+
2
ATCCG
C9E72_RS19310
3618164
3620635
+
Genic
292
NZ_CP028592.1
3619775
3619787
AACCAG
12
+
2
AACCAG
C9E72_RS19310
3618164
3620635
+
Genic
1611
NZ_CP028592.1
3622142
3622154
AAGAT
12
+
2
AGATA
yccA
3622350
3623009
+
Intergenic
-196
NZ_CP028592.1
3622298
3622310
AATGAT
12
-
2
CATTAT
yccA
3622350
3623009
+
Intergenic
-40
NZ_CP028592.1
3623712
3623724
AAGGAT
12
-
2
TCCTTA
C9E72_RS19335
3623426
3623704
-
Intergenic
-8
NZ_CP028592.1
3624657
3624669
ATCGCG
12
+
2
ATCGCG
rlmI
3623799
3624989
+
Genic
858
NZ_CP028592.1
3625416
3625428
AGGCCC
12
+
2
CCAGGC
C9E72_RS19350
3625409
3625822
-
Genic
394
NZ_CP028592.1
3626327
3626340
CCGCG
13
+
2
GCCGC
C9E72_RS19355
3625995
3626657
+
Genic
332
NZ_CP028592.1
3628457
3628469
AGCGCC
12
+
2
CAGCGC
helD
3627243
3629297
-
Genic
828
NZ_CP028592.1
3628871
3628885
AACGGC
14
+
2
CGGCAA
helD
3627243
3629297
-
Genic
412
NZ_CP028592.1
3630139
3630152
AGGGCC
13
-
2
CCCTGG
yccS
3629876
3632038
+
Genic
263
NZ_CP028592.1
3634070
3634083
ACCAT
13
-
2
TGGTA
ompA
3633715
3634755
+
Genic
355
NZ_CP028592.1
3634380
3634392
AACTTC
12
+
2
TTCAAC
ompA
3633715
3634755
+
Genic
665