Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1851 to 1875 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3686556
3686568
AAGAGG
12
+
2
GGAAGA
msbA
3685228
3686976
-
Genic
408
NZ_CP028592.1
3687213
3687225
ATCGGC
12
-
2
CGATGC
C9E72_RS19610
3687013
3689277
-
Genic
2052
NZ_CP028592.1
3687480
3687492
AATGGC
12
-
2
TTGCCA
C9E72_RS19610
3687013
3689277
-
Genic
1785
NZ_CP028592.1
3687686
3687699
AGGCC
13
+
2
CAGGC
C9E72_RS19610
3687013
3689277
-
Genic
1578
NZ_CP028592.1
3689409
3689421
AACTGG
12
-
2
TTCCAG
ihfB
3689484
3689768
-
Intergenic
347
NZ_CP028592.1
3690317
3690329
AACGTG
12
-
2
ACGTTC
rpsA
3689928
3691601
-
Genic
1272
NZ_CP028592.1
3692232
3692244
AACATC
12
+
2
CAACAT
C9E72_RS19625
3691712
3692395
-
Genic
151
NZ_CP028592.1
3693186
3693198
ATCGGC
12
+
2
GCATCG
C9E72_RS19630
3692568
3693332
-
Genic
134
NZ_CP028592.1
3693860
3693872
ATATCC
12
+
2
CATATC
aroA
3693501
3694784
-
Genic
912
NZ_CP028592.1
3694022
3694034
AGC
12
-
4
TGC
aroA
3693501
3694784
-
Genic
750
NZ_CP028592.1
3694135
3694147
AAATTG
12
-
2
TTTCAA
aroA
3693501
3694784
-
Genic
637
NZ_CP028592.1
3694290
3694303
AACGTC
13
+
2
TCAACG
aroA
3693501
3694784
-
Genic
481
NZ_CP028592.1
3695186
3695199
ACCAG
13
+
2
AGACC
serC
3694855
3695943
-
Genic
744
NZ_CP028592.1
3695313
3695325
ACGATG
12
+
2
GACGAT
serC
3694855
3695943
-
Genic
618
NZ_CP028592.1
3698372
3698384
AGCGCC
12
-
2
GCTGGC
C9E72_RS19650
3696964
3698724
+
Genic
1408
NZ_CP028592.1
3698971
3698984
AAAAAT
13
-
2
TTTATT
focA
3699130
3699987
+
Intergenic
-146
NZ_CP028592.1
3699300
3699312
ACAGGC
12
+
2
GGCACA
focA
3699130
3699987
+
Genic
170
NZ_CP028592.1
3700559
3700572
ACGGCC
13
-
2
TGGCCG
pflB
3700042
3702324
+
Genic
517
NZ_CP028592.1
3703039
3703052
ACGATG
13
+
2
TGACGA
pflA
3702516
3703256
+
Genic
523
NZ_CP028592.1
3703840
3703852
ACCAGC
12
+
2
CACCAG
C9E72_RS19675
3703466
3704896
-
Genic
1044
NZ_CP028592.1
3708353
3708365
AAACG
12
-
2
TTTCG
dmsB
3708096
3708713
-
Genic
348
NZ_CP028592.1
3713658
3713670
ACGGGC
12
+
2
CACGGG
C9E72_RS19710
3712790
3714133
-
Genic
463
NZ_CP028592.1
3715140
3715152
AAAGCG
12
-
2
TTCGCT
ftsK
3714910
3718938
-
Genic
3786
NZ_CP028592.1
3716490
3716502
AGCCGC
12
-
2
CTGCGG
ftsK
3714910
3718938
-
Genic
2436
NZ_CP028592.1
3716529
3716542
AGCCGC
13
-
2
CTGCGG
ftsK
3714910
3718938
-
Genic
2396