Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1826 to 1850 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3637538
3637550
AGGCCC
12
-
2
GCCTGG
fabA
3637298
3637816
+
Genic
240
NZ_CP028592.1
3641574
3641586
AACAGC
12
+
2
ACAGCA
pqiA
3640514
3641767
-
Genic
181
NZ_CP028592.1
3644303
3644315
AAAGGC
12
-
2
CTTTGC
rlmKL
3643816
3645924
-
Genic
1609
NZ_CP028592.1
3645584
3645596
AAAGTG
12
-
2
CTTTCA
rlmKL
3643816
3645924
-
Genic
328
NZ_CP028592.1
3645980
3645992
ACATGG
12
+
2
TGGACA
rlmKL
3643816
3645924
-
Intergenic
-56
NZ_CP028592.1
3648503
3648515
AGGCAT
12
+
2
GCATAG
pyrD
3647990
3649000
-
Genic
485
NZ_CP028592.1
3651069
3651082
ACGCCC
13
+
2
CCACGC
C9E72_RS19470
3650891
3651961
-
Genic
879
NZ_CP028592.1
3651405
3651417
AGCGCC
12
+
2
GCGCCA
C9E72_RS19470
3650891
3651961
-
Genic
544
NZ_CP028592.1
3656095
3656107
AAAT
12
+
3
AATA
ssuE
3656255
3656830
+
Intergenic
-148
NZ_CP028592.1
3658849
3658862
AGCCGC
13
+
2
CAGCCG
ssuD
3657779
3658924
+
Genic
1070
NZ_CP028592.1
3663811
3663823
AGCGAT
12
-
2
ATCGCT
pncB
3663412
3664614
+
Genic
399
NZ_CP028592.1
3666613
3666625
AAAGAT
12
-
2
ATCTTT
ompF
3666786
3667874
+
Intergenic
-161
NZ_CP028592.1
3667388
3667400
AATACG
12
+
2
TACGAA
ompF
3666786
3667874
+
Genic
602
NZ_CP028592.1
3673434
3673446
AACGTG
12
-
2
CACGTT
mukB
3672811
3677271
-
Genic
3825
NZ_CP028592.1
3673501
3673513
ACGGAT
12
+
2
ATACGG
mukB
3672811
3677271
-
Genic
3758
NZ_CP028592.1
3673784
3673796
ACCGCC
12
+
2
CCGCCA
mukB
3672811
3677271
-
Genic
3475
NZ_CP028592.1
3675137
3675149
ACGCC
12
-
2
TGGCG
mukB
3672811
3677271
-
Genic
2122
NZ_CP028592.1
3677663
3677675
AGAGAT
12
+
2
GAGATA
mukE
3677271
3677975
-
Genic
300
NZ_CP028592.1
3678726
3678738
AGC
12
-
4
CTG
mukF
3677956
3679278
-
Genic
540
NZ_CP028592.1
3678949
3678962
ATCGGC
13
-
2
ATGCCG
mukF
3677956
3679278
-
Genic
316
NZ_CP028592.1
3679530
3679542
AAAAAG
12
-
2
TTTTTC
cmoM
3679275
3680060
-
Genic
518
NZ_CP028592.1
3682247
3682259
ACGATC
12
+
2
ACGATC
kdsB
3681999
3682745
-
Genic
486
NZ_CP028592.1
3683681
3683693
ACCATC
12
+
2
ATCACC
C9E72_RS19595
3682976
3684208
-
Genic
515
NZ_CP028592.1
3685464
3685477
AATCAG
13
+
2
CAGAAT
msbA
3685228
3686976
-
Genic
1499
NZ_CP028592.1
3685512
3685526
ACGCTG
14
+
2
ACGCTG
msbA
3685228
3686976
-
Genic
1450