Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1901 to 1925 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3766637
3766650
AACTGG
13
+
2
AACTGG
nfsA
3766039
3766761
-
Genic
111
NZ_CP028592.1
3767283
3767296
ACTGAT
13
-
2
TCAGTA
C9E72_RS19960
3767192
3767449
+
Genic
91
NZ_CP028592.1
3768582
3768594
ACTGGC
12
+
2
CACTGG
C9E72_RS19970
3768126
3769811
+
Genic
456
NZ_CP028592.1
3772816
3772828
AACCAC
12
-
2
GTGGTT
C9E72_RS19990
3772715
3772999
+
Genic
101
NZ_CP028592.1
3773587
3773601
AGCGCC
14
+
2
CCAGCG
mdfA
3773040
3774272
-
Genic
671
NZ_CP028592.1
3773998
3774011
ACACC
13
+
2
ACCAC
mdfA
3773040
3774272
-
Genic
261
NZ_CP028592.1
3776552
3776565
AACCGT
13
-
2
ACGGTT
dacC
3776016
3777218
-
Genic
653
NZ_CP028592.1
3776591
3776603
AAAGAG
12
-
2
CTCTTT
dacC
3776016
3777218
-
Genic
615
NZ_CP028592.1
3777951
3777963
AGCGAT
12
-
2
TATCGC
C9E72_RS20015
3777464
3778090
+
Genic
487
NZ_CP028592.1
3778251
3778263
AAAGAT
12
-
2
ATCTTT
C9E72_RS20020
3778087
3779202
-
Genic
939
NZ_CP028592.1
3782225
3782237
AATTAG
12
-
2
ATTCTA
C9E72_RS20045
3782235
3783563
-
Genic
1326
NZ_CP028592.1
3784419
3784431
AAACTG
12
-
2
CAGTTT
C9E72_RS20050
3783571
3785919
-
Genic
1488
NZ_CP028592.1
3785866
3785879
AAAAAT
13
+
2
AATAAA
C9E72_RS20050
3783571
3785919
-
Genic
40
NZ_CP028592.1
3785888
3785902
AAAGAT
14
-
2
TTATCT
C9E72_RS20050
3783571
3785919
-
Genic
17
NZ_CP028592.1
3789965
3789977
AGCGCC
12
-
2
GCGCTG
gsiA
3789507
3791378
-
Genic
1401
NZ_CP028592.1
3793380
3793392
AACGCG
12
-
2
CGTTCG
moeA
3792534
3793769
+
Genic
846
NZ_CP028592.1
3793827
3793839
AAAATC
12
-
2
TTTTGA
moeB
3793769
3794518
+
Genic
58
NZ_CP028592.1
3793949
3793961
AAGTCG
12
-
2
TCGACT
moeB
3793769
3794518
+
Genic
180
NZ_CP028592.1
3794932
3794944
ACCGCT
12
+
2
TACCGC
fsa
3794697
3795359
-
Genic
415
NZ_CP028592.1
3796550
3796564
AGCGCC
14
-
2
GCGCTG
C9E72_RS20095
3795490
3796389
+
Intergenic
1060
NZ_CP028592.1
3796637
3796649
CCGCG
12
+
2
CGCGC
C9E72_RS20095
3795490
3796389
+
Intergenic
1147
NZ_CP028592.1
3797937
3797950
AAATCG
13
+
2
AATCGA
ybiV
3798972
3799787
+
Intergenic
-1022
NZ_CP028592.1
3801994
3802006
AAGTGG
12
-
2
CTTCCA
C9E72_RS20115
3801372
3802964
-
Genic
958
NZ_CP028592.1
3802396
3802408
ACATCG
12
-
2
TGTCGA
C9E72_RS20115
3801372
3802964
-
Genic
556
NZ_CP028592.1
3805385
3805397
AACACC
12
+
2
CCAACA
C9E72_RS20130
3805276
3805743
-
Genic
346