Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1951 to 1975 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3838974
3838986
AGGGCG
12
-
2
TCGCCC
C9E72_RS20280
3838365
3839321
+
Genic
609
NZ_CP028592.1
3839651
3839664
AATCAT
13
+
2
ATCATA
C9E72_RS20285
3839357
3840070
-
Genic
406
NZ_CP028592.1
3840093
3840105
AATATT
12
+
2
AATATT
C9E72_RS20285
3839357
3840070
-
Intergenic
-23
NZ_CP028592.1
3841678
3841692
AGCGCC
14
+
2
CCAGCG
moaD
3841572
3841817
-
Genic
125
NZ_CP028592.1
3848202
3848214
AAAGTG
12
+
2
AAAGTG
bioD
3847917
3848594
-
Genic
380
NZ_CP028592.1
3850837
3850849
AAGGTG
12
-
2
TTCACC
C9E72_RS20345
3850480
3851520
-
Genic
671
NZ_CP028592.1
3851250
3851262
AAAGCG
12
-
2
CGCTTT
C9E72_RS20345
3850480
3851520
-
Genic
258
NZ_CP028592.1
3853123
3853135
AGCCGG
12
-
2
CCGGCT
C9E72_RS20355
3852955
3853431
+
Genic
168
NZ_CP028592.1
3854566
3854578
ACAGAT
12
-
2
TATCTG
nleD
3853938
3854636
-
Genic
58
NZ_CP028592.1
3857151
3857163
AATATG
12
-
2
TCATAT
nleC
3856575
3857594
-
Genic
431
NZ_CP028592.1
3857532
3857544
AACTTC
12
-
2
AAGTTG
nleC
3856575
3857594
-
Genic
50
NZ_CP028592.1
3857725
3857737
AAAATT
12
+
2
TAAAAT
nleB2
3857628
3858608
-
Genic
871
NZ_CP028592.1
3857945
3857957
ATATCC
12
+
2
CATATC
nleB2
3857628
3858608
-
Genic
651
NZ_CP028592.1
3858075
3858087
AAAAG
12
-
2
TTTCT
nleB2
3857628
3858608
-
Genic
521
NZ_CP028592.1
3859833
3859846
ACGAGG
13
+
2
GAGGAC
C9E72_RS20400
3859056
3860372
-
Genic
526
NZ_CP028592.1
3862176
3862188
AATATC
12
-
2
TTGATA
C9E72_RS20405
3860432
3861031
-
Intergenic
-1145
NZ_CP028592.1
3862995
3863007
ACGCTG
12
-
2
AGCGTC
C9E72_RS20415
3864576
3865184
-
Intergenic
2177
NZ_CP028592.1
3864290
3864302
AGCAGG
12
-
2
CTGCTC
C9E72_RS20415
3864576
3865184
-
Intergenic
882
NZ_CP028592.1
3866044
3866056
ACCTGC
12
-
2
CAGGTG
C9E72_RS20425
3865870
3866568
-
Genic
512
NZ_CP028592.1
3867183
3867195
AAAAGC
12
+
2
GCAAAA
C9E72_RS20435
3866907
3869972
-
Genic
2777
NZ_CP028592.1
3867728
3867740
ACAGCG
12
-
2
TCGCTG
C9E72_RS20435
3866907
3869972
-
Genic
2232
NZ_CP028592.1
3870487
3870499
ATCCCC
12
+
2
CCATCC
C9E72_RS20445
3870282
3870668
-
Genic
169
NZ_CP028592.1
3870754
3870768
ACAGCC
14
+
2
CAGCCA
C9E72_RS20450
3870729
3871472
-
Genic
704
NZ_CP028592.1
3875065
3875079
AAATAT
14
+
2
ATAAAT
C9E72_RS20475
3873149
3875176
-
Genic
97
NZ_CP028592.1
3876897
3876909
AAAAAC
12
-
2
GTTTTT
C9E72_RS20490
3876630
3876842
-
Intergenic
-55