Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1976 to 2000 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3881528
3881540
AATGAT
12
+
2
ATAATG
C9E72_RS20530
3881565
3881963
+
Intergenic
-25
NZ_CP028592.1
3881780
3881792
AACCGG
12
+
2
CCGGAA
C9E72_RS20530
3881565
3881963
+
Genic
215
NZ_CP028592.1
3882145
3882157
ACCATC
12
+
2
CATCAC
C9E72_RS20535
3882044
3882202
-
Genic
45
NZ_CP028592.1
3883121
3883133
AAGTAC
12
+
2
GTACAA
C9E72_RS20545
3883215
3883904
-
Intergenic
771
NZ_CP028592.1
3883997
3884009
ACAGCG
12
+
2
CAGCGA
C9E72_RS20550
3883919
3884041
-
Genic
32
NZ_CP028592.1
3884156
3884168
AAATTT
12
+
2
ATTTAA
C9E72_RS20550
3883919
3884041
-
Intergenic
-115
NZ_CP028592.1
3884166
3884179
AAAAT
13
+
2
AATAA
C9E72_RS20550
3883919
3884041
-
Intergenic
-125
NZ_CP028592.1
3884994
3885006
AATGGC
12
-
2
CCATTG
C9E72_RS20555
3884379
3885338
+
Genic
615
NZ_CP028592.1
3886631
3886643
AAACAG
12
-
2
TTTCTG
C9E72_RS20570
3886212
3886832
-
Genic
189
NZ_CP028592.1
3888863
3888876
AAGCAG
13
+
2
AAGCAG
C9E72_RS20600
3888704
3888895
+
Genic
159
NZ_CP028592.1
3890583
3890595
AATGG
12
+
2
GAATG
C9E72_RS20625
3890563
3890730
+
Genic
20
NZ_CP028592.1
3891134
3891146
AAACAC
12
+
2
ACACAA
C9E72_RS20635
3891151
3892032
+
Intergenic
-5
NZ_CP028592.1
3892787
3892799
AACTGC
12
+
2
CTGCAA
C9E72_RS20640
3892167
3893450
+
Genic
620
NZ_CP028592.1
3893765
3893777
AAATGT
12
+
2
ATGTAA
C9E72_RS20645
3893591
3895852
-
Genic
2075
NZ_CP028592.1
3894610
3894622
AGGCGC
12
-
2
TGCGCC
C9E72_RS20645
3893591
3895852
-
Genic
1230
NZ_CP028592.1
3895992
3896004
ACGCAG
12
+
2
ACGCAG
C9E72_RS20650
3896035
3897468
-
Intergenic
1464
NZ_CP028592.1
3897084
3897096
ACCCAG
12
+
2
ACCCAG
C9E72_RS20650
3896035
3897468
-
Genic
372
NZ_CP028592.1
3897667
3897679
AATATC
12
-
2
ATATTG
C9E72_RS20655
3897544
3898596
-
Genic
917
NZ_CP028592.1
3897741
3897754
AATAGC
13
+
2
AATAGC
C9E72_RS20655
3897544
3898596
-
Genic
842
NZ_CP028592.1
3900573
3900585
ACGAT
12
+
2
CGATA
C9E72_RS20665
3899774
3900769
-
Genic
184
NZ_CP028592.1
3901087
3901101
AGCGCC
14
-
2
GGCGCT
C9E72_RS20670
3900924
3901742
+
Genic
163
NZ_CP028592.1
3901862
3901874
AAGTGG
12
-
2
TTCCAC
modC
3901743
3902801
-
Genic
927
NZ_CP028592.1
3902041
3902054
AGCGCC
13
+
2
CCAGCG
modC
3901743
3902801
-
Genic
747
NZ_CP028592.1
3902345
3902357
AACAGC
12
+
2
CAGCAA
modC
3901743
3902801
-
Genic
444
NZ_CP028592.1
3903207
3903219
CCGCG
12
+
2
CCGCG
modB
3902804
3903493
-
Genic
274