Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2026 to 2050 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3948787
3948799
AAAGAG
12
-
2
TCTTTC
C9E72_RS20930
3948208
3948924
-
Genic
125
NZ_CP028592.1
3949447
3949459
AGATGC
12
+
2
TGCAGA
sdhA
3948940
3950706
-
Genic
1247
NZ_CP028592.1
3949762
3949774
AAACTG
12
-
2
AGTTTC
sdhA
3948940
3950706
-
Genic
932
NZ_CP028592.1
3954615
3954627
AAT
12
+
4
TAA
C9E72_RS20965
3954440
3956890
+
Genic
175
NZ_CP028592.1
3954953
3954965
AGC
12
+
4
GCA
C9E72_RS20965
3954440
3956890
+
Genic
513
NZ_CP028592.1
3956335
3956347
ACTGGC
12
-
2
GCCAGT
C9E72_RS20965
3954440
3956890
+
Genic
1895
NZ_CP028592.1
3957691
3957704
AGCGCC
13
-
2
GGCGCT
C9E72_RS20975
3957633
3958694
+
Genic
58
NZ_CP028592.1
3962823
3962835
AGCGCC
12
+
2
CCAGCG
pxpB
3962363
3963019
-
Genic
184
NZ_CP028592.1
3962961
3962974
AACTGG
13
-
2
GTTCCA
pxpB
3962363
3963019
-
Genic
45
NZ_CP028592.1
3965102
3965116
AAGGCC
14
-
2
CTTGGC
dtpD
3964056
3965537
+
Genic
1046
NZ_CP028592.1
3965516
3965529
AGCGCC
13
-
2
GCGCTG
dtpD
3964056
3965537
+
Genic
1460
NZ_CP028592.1
3972609
3972621
ACAGCT
12
-
2
GCTGTA
C9E72_RS21050
3971050
3975249
-
Genic
2628
NZ_CP028592.1
3973121
3973133
ACCGC
12
-
2
CGGTG
C9E72_RS21050
3971050
3975249
-
Genic
2116
NZ_CP028592.1
3973583
3973595
ACCATG
12
-
2
GGTCAT
C9E72_RS21050
3971050
3975249
-
Genic
1654
NZ_CP028592.1
3974079
3974092
ACCATC
13
-
2
GGTGAT
C9E72_RS21050
3971050
3975249
-
Genic
1157
NZ_CP028592.1
3974166
3974179
AACGGT
13
+
2
GTAACG
C9E72_RS21050
3971050
3975249
-
Genic
1070
NZ_CP028592.1
3978691
3978704
AACGTC
13
-
2
TGACGT
kdpB
3977796
3979844
+
Genic
895
NZ_CP028592.1
3978880
3978892
AGCGCG
12
+
2
GCGCGA
kdpB
3977796
3979844
+
Genic
1084
NZ_CP028592.1
3981722
3981735
ACC
13
-
4
GTG
kdbD
3980418
3983102
+
Genic
1304
NZ_CP028592.1
3982168
3982180
ACCCGC
12
-
2
TGCGGG
kdbD
3980418
3983102
+
Genic
1750
NZ_CP028592.1
3982248
3982260
ACC
12
-
4
TGG
kdbD
3980418
3983102
+
Genic
1830
NZ_CP028592.1
3982348
3982360
ACGCTG
12
+
2
GCTGAC
kdbD
3980418
3983102
+
Genic
1930
NZ_CP028592.1
3984038
3984051
AAAGGT
13
+
2
AGGTAA
C9E72_RS21095
3984051
3984155
+
Genic
0
NZ_CP028592.1
3987163
3987175
AACCAG
12
-
2
CTGGTT
potE
3986661
3987980
+
Genic
502
NZ_CP028592.1
3988913
3988925
AACCTC
12
-
2
AGGTTG
C9E72_RS21110
3988037
3989677
-
Genic
752