Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2076 to 2100 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4030828
4030840
AGCGCC
12
-
2
GCTGGC
holA
4030296
4031327
+
Genic
532
NZ_CP028592.1
4031242
4031254
ACTG
12
-
3
CAGT
holA
4030296
4031327
+
Genic
946
NZ_CP028592.1
4031679
4031691
AATACG
12
+
2
TACGAA
nadD
4031329
4031970
+
Genic
350
NZ_CP028592.1
4036204
4036217
AGCGCC
13
+
2
CCAGCG
mrdB
4035588
4036700
+
Genic
616
NZ_CP028592.1
4038574
4038586
AAAAAG
12
+
2
AAAGAA
dacA
4037939
4039150
+
Genic
635
NZ_CP028592.1
4038861
4038874
AAACC
13
-
2
GGTTT
dacA
4037939
4039150
+
Genic
922
NZ_CP028592.1
4039434
4039446
ACTATC
12
+
2
CTATCA
C9E72_RS21380
4039260
4039523
+
Genic
174
NZ_CP028592.1
4043400
4043412
AGCGCC
12
+
2
GCCAGC
C9E72_RS21405
4043085
4043873
-
Genic
461
NZ_CP028592.1
4049840
4049852
AAAT
12
+
3
TAAA
dpiB
4048011
4049669
-
Intergenic
-171
NZ_CP028592.1
4053158
4053170
ACCGGC
12
+
2
ACCGGC
citF
4052334
4053866
+
Genic
824
NZ_CP028592.1
4059710
4059722
AACGGC
12
-
2
GCCGTT
C9E72_RS21485
4058579
4059817
-
Genic
95
NZ_CP028592.1
4060169
4060181
AGCCTG
12
+
2
AGCCTG
uspG
4060038
4060466
+
Genic
131
NZ_CP028592.1
4062120
4062132
AACTC
12
-
2
TTGAG
ahpF
4060587
4062152
-
Genic
20
NZ_CP028592.1
4062729
4062741
AAG
12
+
4
AGA
ahpC
4062281
4062844
-
Genic
103
NZ_CP028592.1
4065746
4065758
ATCGCC
12
+
2
TCGCCA
C9E72_RS21515
4065221
4066441
+
Genic
525
NZ_CP028592.1
4067511
4067524
ACCGCC
13
+
2
CACCGC
ybdL
4067044
4068204
-
Genic
680
NZ_CP028592.1
4072697
4072710
ACCGAT
13
-
2
TATCGG
dhbA
4072492
4073238
-
Genic
528
NZ_CP028592.1
4072863
4072876
CCCCG
13
+
2
CGCCC
dhbA
4072492
4073238
-
Genic
362
NZ_CP028592.1
4073903
4073915
AGCGC
12
+
2
GCGCA
entB
4073238
4074095
-
Genic
180
NZ_CP028592.1
4074607
4074619
ATCGGC
12
+
2
TCGGCA
entE
4074109
4075719
-
Genic
1100
NZ_CP028592.1
4076174
4076187
AACATG
13
-
2
GTTCAT
entC
4075729
4076904
-
Genic
717
NZ_CP028592.1
4077475
4077488
AGCGCC
13
-
2
GGCGCT
fepB
4077093
4078049
+
Genic
382
NZ_CP028592.1
4078106
4078120
ACCAGC
14
+
2
CACCAG
entS
4078053
4079303
-
Genic
1183
NZ_CP028592.1
4078284
4078296
AAACGC
12
-
2
GTTTGC
entS
4078053
4079303
-
Genic
1007
NZ_CP028592.1
4078693
4078707
ACCGCC
14
-
2
GCGGTG
entS
4078053
4079303
-
Genic
596