Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2051 to 2075 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3989789
3989805
AACACC
16
-
2
GGTGTT
seqA
3989703
3990248
-
Genic
443
NZ_CP028592.1
3994859
3994872
AGCGCC
13
+
2
GCCAGC
C9E72_RS21155
3995212
3995406
+
Intergenic
-340
NZ_CP028592.1
3994951
3994963
AAAAAT
12
+
2
AAAAAT
C9E72_RS21155
3995212
3995406
+
Intergenic
-249
NZ_CP028592.1
3996057
3996069
AAGGCG
12
-
2
TTCGCC
glnS
3995479
3997143
-
Genic
1074
NZ_CP028592.1
3998338
3998350
AAAGAG
12
+
2
AGAGAA
nagE
3997346
3999292
-
Genic
942
NZ_CP028592.1
4000087
4000099
ACGAGT
12
-
2
CTCGTA
nagB
3999625
4000425
+
Genic
462
NZ_CP028592.1
4002235
4002247
AGCGCC
12
-
2
CTGGCG
nagC
4001642
4002862
+
Genic
593
NZ_CP028592.1
4002353
4002365
AACGGC
12
+
2
GCAACG
nagC
4001642
4002862
+
Genic
711
NZ_CP028592.1
4004281
4004293
AAAGGC
12
-
2
TTTGCC
C9E72_RS21190
4003919
4005583
+
Genic
362
NZ_CP028592.1
4005360
4005374
AAGCGG
14
-
2
CCGCTT
C9E72_RS21190
4003919
4005583
+
Genic
1441
NZ_CP028592.1
4007271
4007284
AATATG
13
-
2
CATATT
ubiF
4006822
4007997
-
Genic
713
NZ_CP028592.1
4007547
4007560
AGCTCC
13
+
2
CAGCTC
ubiF
4006822
4007997
-
Genic
437
NZ_CP028592.1
4007731
4007743
ACTCCC
12
+
2
TCCCAC
ubiF
4006822
4007997
-
Genic
254
NZ_CP028592.1
4010149
4010161
ACCCGT
12
-
2
CGGGTA
C9E72_RS21240
4009681
4010760
+
Genic
468
NZ_CP028592.1
4012080
4012093
ACATCG
13
+
2
CATCGA
corC
4011314
4012192
+
Genic
766
NZ_CP028592.1
4012823
4012836
AAGGG
13
-
2
CCCTT
lnt
4012217
4013755
+
Genic
606
NZ_CP028592.1
4014180
4014192
AGGGCC
12
-
2
CCTGGC
gltI
4014152
4015060
+
Genic
28
NZ_CP028592.1
4014468
4014480
AAAATC
12
-
2
TTTTGA
gltI
4014152
4015060
+
Genic
316
NZ_CP028592.1
4017546
4017558
AGGGCG
12
-
2
CTCGCC
rihA
4017487
4018422
+
Genic
59
NZ_CP028592.1
4020033
4020045
CCCGCG
12
-
2
GGGCGC
C9E72_RS21285
4018506
4020176
+
Genic
1527
NZ_CP028592.1
4022895
4022908
AGCATG
13
-
2
ATGCTC
C9E72_RS21300
4022493
4023047
+
Genic
402
NZ_CP028592.1
4025345
4025357
AATGAT
12
+
2
AATGAT
C9E72_RS21310
4024481
4025188
-
Intergenic
-157
NZ_CP028592.1
4027040
4027052
AGCAT
12
-
2
GCTAT
leuS
4027118
4029700
+
Intergenic
-66
NZ_CP028592.1
4027987
4027999
AAGCTG
12
+
2
GCTGAA
leuS
4027118
4029700
+
Genic
869
NZ_CP028592.1
4029446
4029459
AAGGCG
13
+
2
AAGGCG
leuS
4027118
4029700
+
Genic
2328