Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2801 to 2825 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1850990
1851003
AGCGCG
13
-
2
CGCTCG
UKMR15_RS08150
1850948
1851427
+
Genic
-42
NZ_LR595896.1
1851251
1851263
ACGCCG
12
-
2
TCGGCG
UKMR15_RS08150
1850948
1851427
+
Genic
-303
NZ_LR595896.1
1852568
1852580
ATCGGC
12
+
2
GCATCG
UKMR15_RS08160
1852527
1853975
+
Genic
-41
NZ_LR595896.1
1852601
1852614
CCGCG
13
-
2
GCGGC
UKMR15_RS08160
1852527
1853975
+
Genic
-74
NZ_LR595896.1
1852636
1852651
AGCGCG
15
-
2
GCTCGC
UKMR15_RS08160
1852527
1853975
+
Genic
-109
NZ_LR595896.1
1852741
1852754
CCGGCG
13
+
2
GCCGGC
UKMR15_RS08160
1852527
1853975
+
Genic
-214
NZ_LR595896.1
1852788
1852800
ACGTGC
12
+
2
ACGTGC
UKMR15_RS08160
1852527
1853975
+
Genic
-261
NZ_LR595896.1
1852901
1852913
ACATCG
12
-
2
GTCGAT
UKMR15_RS08160
1852527
1853975
+
Genic
-374
NZ_LR595896.1
1853018
1853032
ACGCGG
14
+
2
GCGGAC
UKMR15_RS08160
1852527
1853975
+
Genic
-491
NZ_LR595896.1
1853688
1853700
AAGAGC
12
+
2
AGAGCA
UKMR15_RS08160
1852527
1853975
+
Genic
-1161
NZ_LR595896.1
1854731
1854745
ACGATC
14
-
2
CGTGAT
UKMR15_RS08165
1854009
1854422
+
Intergenic
-722
NZ_LR595896.1
1854911
1854923
ACGCCG
12
-
2
CGGCGT
UKMR15_RS08165
1854009
1854422
+
Intergenic
-902
NZ_LR595896.1
1854937
1854949
AGCGCG
12
-
2
TCGCGC
UKMR15_RS08165
1854009
1854422
+
Intergenic
-928
NZ_LR595896.1
1855177
1855189
CCCGCG
12
-
2
GCGCGG
UKMR15_RS08175
1855667
1857232
+
Intergenic
478
NZ_LR595896.1
1855369
1855381
ACGGCG
12
+
2
GCGACG
UKMR15_RS08175
1855667
1857232
+
Intergenic
286
NZ_LR595896.1
1855504
1855516
ACGGCG
12
-
2
TCGCCG
UKMR15_RS08175
1855667
1857232
+
Intergenic
151
NZ_LR595896.1
1856443
1856455
AGATCG
12
-
2
TCGATC
UKMR15_RS08175
1855667
1857232
+
Genic
-776
NZ_LR595896.1
1857510
1857523
CCG
13
-
4
GGC
UKMR15_RS08180
1857229
1858224
+
Genic
-281
NZ_LR595896.1
1857532
1857544
AACGCG
12
-
2
TCGCGT
UKMR15_RS08180
1857229
1858224
+
Genic
-303
NZ_LR595896.1
1857608
1857621
AGCGCG
13
-
2
GCTCGC
UKMR15_RS08180
1857229
1858224
+
Genic
-379
NZ_LR595896.1
1857635
1857647
CCGCG
12
-
2
CGGCG
UKMR15_RS08180
1857229
1858224
+
Genic
-406
NZ_LR595896.1
1858261
1858273
ACGGCG
12
-
2
CGTCGC
UKMR15_RS08185
1858221
1859165
+
Genic
-40
NZ_LR595896.1
1858327
1858340
CG
13
+
6
GC
UKMR15_RS08185
1858221
1859165
+
Genic
-106
NZ_LR595896.1
1858570
1858584
AGCGCG
14
-
2
CGCGCT
UKMR15_RS08185
1858221
1859165
+
Genic
-349
NZ_LR595896.1
1859403
1859415
ACGGCG
12
+
2
CGGCGA
UKMR15_RS08190
1859162
1860292
+
Genic
-241