Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2776 to 2800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1834408
1834421
CCCGCG
13
-
2
CGCGGG
UKMR15_RS08085
1833633
1834646
+
Genic
-775
NZ_LR595896.1
1835096
1835108
ACG
12
-
4
TCG
UKMR15_RS08090
1834676
1835707
+
Genic
-420
NZ_LR595896.1
1836011
1836023
ACGGCG
12
+
2
GCGACG
UKMR15_RS08090
1834676
1835707
+
Intergenic
-1335
NZ_LR595896.1
1836067
1836079
ACGATC
12
-
2
GATCGT
UKMR15_RS08090
1834676
1835707
+
Intergenic
-1391
NZ_LR595896.1
1837466
1837480
AGCGCG
14
-
2
CGCGCT
UKMR15_RS08100
1836889
1838817
+
Genic
-577
NZ_LR595896.1
1838698
1838711
CCGCG
13
+
2
CGCCG
UKMR15_RS08100
1836889
1838817
+
Genic
-1809
NZ_LR595896.1
1840325
1840337
ACGCCG
12
+
2
CGACGC
UKMR15_RS08105
1839619
1841541
+
Genic
-706
NZ_LR595896.1
1841147
1841159
ACCAGG
12
+
2
CCAGGA
UKMR15_RS08105
1839619
1841541
+
Genic
-1528
NZ_LR595896.1
1841545
1841558
ACGCG
13
+
2
CGCGA
UKMR15_RS08105
1839619
1841541
+
Intergenic
-1926
NZ_LR595896.1
1841978
1841990
AAGGCG
12
+
2
CGAAGG
UKMR15_RS08110
1841665
1842930
+
Genic
-313
NZ_LR595896.1
1843403
1843415
ACGATG
12
+
2
ACGATG
UKMR15_RS08115
1842930
1844612
+
Genic
-473
NZ_LR595896.1
1843675
1843688
AGCGCG
13
+
2
GCGCGA
UKMR15_RS08115
1842930
1844612
+
Genic
-745
NZ_LR595896.1
1844846
1844869
ACCGC
23
+
4
CGCAC
UKMR15_RS08120
1845092
1846396
+
Intergenic
223
NZ_LR595896.1
1845614
1845628
ACGAGC
14
-
2
TGCTCG
UKMR15_RS08120
1845092
1846396
+
Genic
-522
NZ_LR595896.1
1846677
1846689
AGAGCG
12
-
2
CTCGCT
UKMR15_RS08125
1846649
1847695
+
Genic
-28
NZ_LR595896.1
1846944
1846958
CCCGCG
14
-
2
CGCGGG
UKMR15_RS08125
1846649
1847695
+
Genic
-295
NZ_LR595896.1
1848143
1848158
ATATCG
15
+
2
CGATAT
UKMR15_RS08130
1847656
1848219
-
Genic
-487
NZ_LR595896.1
1848983
1848995
AACAGC
12
-
2
TGCTGT
UKMR15_RS08135
1848302
1849132
+
Genic
-681
NZ_LR595896.1
1849174
1849188
AGCGCG
14
-
2
GCTCGC
UKMR15_RS08140
1849158
1850099
+
Genic
-16
NZ_LR595896.1
1849275
1849290
CCGCG
15
+
3
GCCGC
UKMR15_RS08140
1849158
1850099
+
Genic
-117
NZ_LR595896.1
1849355
1849372
AGCGCG
17
-
2
GCGCTC
UKMR15_RS08140
1849158
1850099
+
Genic
-197
NZ_LR595896.1
1849692
1849704
ACGAGC
12
-
2
TCGTGC
UKMR15_RS08140
1849158
1850099
+
Genic
-534
NZ_LR595896.1
1850099
1850128
CCCGCG
29
+
4
CGCGCC
UKMR15_RS08140
1849158
1850099
+
Genic
-941
NZ_LR595896.1
1850124
1850164
AGGCGC
40
+
6
GCGCAG
UKMR15_RS08140
1849158
1850099
+
Intergenic
-966
NZ_LR595896.1
1850159
1850174
CCCGCG
15
-
2
GGCGCG
UKMR15_RS08140
1849158
1850099
+
Intergenic
-1001