Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2726 to 2750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1803767
1803779
ACCGCG
12
-
2
TCGCGG
UKMR15_RS07925
1803410
1803907
+
Genic
-357
NZ_LR595896.1
1803936
1803951
ATCGCG
15
+
2
TCGCGA
UKMR15_RS07930
1803912
1804250
+
Genic
-24
NZ_LR595896.1
1804059
1804071
ACGCTC
12
+
2
CGCTCA
UKMR15_RS07930
1803912
1804250
+
Genic
-147
NZ_LR595896.1
1804979
1804991
CCCGCG
12
+
2
CGCCCG
UKMR15_RS07935
1804280
1805422
+
Genic
-699
NZ_LR595896.1
1805549
1805563
CCGCG
14
-
2
GGCGC
UKMR15_RS07935
1804280
1805422
+
Intergenic
-1269
NZ_LR595896.1
1805935
1805948
AGCCCC
13
+
2
GCCCCA
UKMR15_RS07940
1805879
1806343
-
Genic
-56
NZ_LR595896.1
1806535
1806547
ACGCGC
12
-
2
GCGCGT
ssuD
1806678
1807835
+
Intergenic
131
NZ_LR595896.1
1806752
1806764
ACGACT
12
+
2
GACTAC
ssuD
1806678
1807835
+
Genic
-74
NZ_LR595896.1
1807316
1807328
CG
12
+
6
CG
ssuD
1806678
1807835
+
Genic
-638
NZ_LR595896.1
1807888
1807901
CCGCG
13
+
2
CGCCG
ssuC
1807853
1808662
+
Genic
-35
NZ_LR595896.1
1808785
1808797
CG
12
+
6
GC
UKMR15_RS07955
1808659
1809666
+
Genic
-126
NZ_LR595896.1
1808855
1808867
AGCAGG
12
+
2
AGCAGG
UKMR15_RS07955
1808659
1809666
+
Genic
-196
NZ_LR595896.1
1809144
1809157
AGGCCG
13
-
2
CTCGGC
UKMR15_RS07955
1808659
1809666
+
Genic
-485
NZ_LR595896.1
1809244
1809257
AGCGGC
13
+
2
GGCAGC
UKMR15_RS07955
1808659
1809666
+
Genic
-585
NZ_LR595896.1
1809259
1809271
AGCGCG
12
-
2
TCGCGC
UKMR15_RS07955
1808659
1809666
+
Genic
-600
NZ_LR595896.1
1809625
1809639
CCGCG
14
+
2
GCCGC
UKMR15_RS07955
1808659
1809666
+
Genic
-966
NZ_LR595896.1
1809836
1809848
ACGTCG
12
+
2
GTCGAC
UKMR15_RS07960
1809756
1809971
+
Genic
-80
NZ_LR595896.1
1811848
1811860
CCGGCG
12
+
2
CGGCGC
dusA
1811600
1812619
-
Genic
-248
NZ_LR595896.1
1813797
1813810
AGCGCG
13
+
2
AGCGCG
UKMR15_RS07985
1813197
1814504
-
Genic
-600
NZ_LR595896.1
1814869
1814881
AACG
12
-
3
CGTT
UKMR15_RS07990
1814729
1815295
+
Genic
-140
NZ_LR595896.1
1814930
1814942
CCGCG
12
-
2
GCGCG
UKMR15_RS07990
1814729
1815295
+
Genic
-201
NZ_LR595896.1
1815646
1815661
CCG
15
+
5
CGC
UKMR15_RS07995
1815685
1816161
-
Intergenic
24
NZ_LR595896.1
1815718
1815730
CCCCGG
12
+
2
CCCGGC
UKMR15_RS07995
1815685
1816161
-
Genic
-33
NZ_LR595896.1
1816381
1816394
CCG
13
-
4
GCG
UKMR15_RS08000
1816343
1816780
+
Genic
-38
NZ_LR595896.1
1816942
1816955
ACGGCG
13
+
2
GGCGAC
UKMR15_RS08005
1817067
1818119
+
Intergenic
112