Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2676 to 2700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1771471
1771484
CCGGCG
13
+
2
GCCGGC
UKMR15_RS07765
1770294
1771685
+
Genic
-1177
NZ_LR595896.1
1771822
1771834
ATGCGC
12
+
2
TGCGCA
UKMR15_RS07770
1771776
1772489
+
Genic
-46
NZ_LR595896.1
1772563
1772577
AGCGC
14
-
2
GCGCT
hfq
1772640
1773290
-
Intergenic
63
NZ_LR595896.1
1772666
1772678
ACGGCG
12
+
2
ACGGCG
hfq
1772640
1773290
-
Genic
-26
NZ_LR595896.1
1772693
1772713
AACGGC
20
-
3
GCCGTT
hfq
1772640
1773290
-
Genic
-53
NZ_LR595896.1
1773024
1773036
CCG
12
+
4
CCG
hfq
1772640
1773290
-
Genic
-384
NZ_LR595896.1
1775805
1775817
AAGCTC
12
-
2
GAGCTT
UKMR15_RS07795
1775074
1776846
-
Genic
-731
NZ_LR595896.1
1775964
1775977
AGGCCG
13
+
2
GCCGAG
UKMR15_RS07795
1775074
1776846
-
Genic
-890
NZ_LR595896.1
1776016
1776028
AGCGGC
12
+
2
AGCGGC
UKMR15_RS07795
1775074
1776846
-
Genic
-942
NZ_LR595896.1
1776191
1776204
CCCGCG
13
-
2
CGGGCG
UKMR15_RS07795
1775074
1776846
-
Genic
-1117
NZ_LR595896.1
1776813
1776826
ACGCCC
13
-
2
GTGGGC
UKMR15_RS07795
1775074
1776846
-
Genic
-1739
NZ_LR595896.1
1777428
1777440
AAACGG
12
-
2
TTTCCG
UKMR15_RS07800
1777031
1777981
-
Genic
-397
NZ_LR595896.1
1778513
1778528
AGCGCG
15
+
2
GCGAGC
UKMR15_RS07805
1778198
1779424
-
Genic
-315
NZ_LR595896.1
1779024
1779036
CG
12
+
6
CG
UKMR15_RS07805
1778198
1779424
-
Genic
-826
NZ_LR595896.1
1779415
1779427
ATGGCC
12
+
2
CATGGC
UKMR15_RS07805
1778198
1779424
-
Genic
-1217
NZ_LR595896.1
1779801
1779813
AAAG
12
-
3
TTTC
UKMR15_RS07810
1779834
1780388
+
Intergenic
21
NZ_LR595896.1
1782009
1782021
AGCATC
12
-
2
GCTGAT
UKMR15_RS07820
1781204
1782916
+
Genic
-805
NZ_LR595896.1
1783206
1783218
ACGGGC
12
-
2
CCGTGC
UKMR15_RS07825
1782967
1783206
+
Genic
-239
NZ_LR595896.1
1784656
1784668
ACCTCG
12
-
2
GGTCGA
UKMR15_RS07830
1783293
1784879
-
Genic
-1363
NZ_LR595896.1
1784991
1785003
ATCGCG
12
+
2
CGCGAT
UKMR15_RS07835
1785114
1786601
-
Intergenic
111
NZ_LR595896.1
1785145
1785158
AACAGC
13
-
2
GTTGCT
UKMR15_RS07835
1785114
1786601
-
Genic
-31
NZ_LR595896.1
1785443
1785456
CCGCG
13
-
2
CGGCG
UKMR15_RS07835
1785114
1786601
-
Genic
-329
NZ_LR595896.1
1785586
1785598
ACGCGC
12
+
2
GCACGC
UKMR15_RS07835
1785114
1786601
-
Genic
-472
NZ_LR595896.1
1786094
1786107
ACGATG
13
-
2
CATCGT
UKMR15_RS07835
1785114
1786601
-
Genic
-980
NZ_LR595896.1
1788283
1788296
ACCGAG
13
-
2
CTCGGT
UKMR15_RS07840
1787136
1788848
+
Genic
-1147