Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2626 to 2650 repeats of 10659
Go To:
<<
<
104
105
106
107
108
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1740166
1740178
ATCGCG
12
+
2
GCGATC
UKMR15_RS07640
1739029
1740264
-
Genic
-1137
NZ_LR595896.1
1740202
1740215
AAGCGC
13
-
2
CGCTTG
UKMR15_RS07640
1739029
1740264
-
Genic
-1173
NZ_LR595896.1
1740348
1740360
CCCGCG
12
-
2
GCGCGG
UKMR15_RS07645
1740332
1741828
-
Genic
-16
NZ_LR595896.1
1740834
1740847
AAGCCG
13
+
2
CGAAGC
UKMR15_RS07645
1740332
1741828
-
Genic
-502
NZ_LR595896.1
1741560
1741576
AGGCGC
16
-
2
GCGCCT
UKMR15_RS07645
1740332
1741828
-
Genic
-1228
NZ_LR595896.1
1741759
1741775
AGCGCG
16
+
2
CGCGAG
UKMR15_RS07645
1740332
1741828
-
Genic
-1427
NZ_LR595896.1
1742567
1742579
CCGGCG
12
+
2
GCGCCG
typA
1742718
1744544
+
Intergenic
139
NZ_LR595896.1
1743062
1743075
AGCGCG
13
-
2
GCGCTC
typA
1742718
1744544
+
Genic
-344
NZ_LR595896.1
1744525
1744539
AGGCCG
14
+
2
CGAGGC
typA
1742718
1744544
+
Genic
-1807
NZ_LR595896.1
1748027
1748039
CCGGCG
12
+
2
GCCGGC
odhB
1747882
1749147
+
Genic
-145
NZ_LR595896.1
1748139
1748152
AGCGGC
13
+
2
GCGGCA
odhB
1747882
1749147
+
Genic
-257
NZ_LR595896.1
1748214
1748228
CCG
14
+
4
GCC
odhB
1747882
1749147
+
Genic
-332
NZ_LR595896.1
1748890
1748902
AGATCG
12
-
2
TCTCGA
odhB
1747882
1749147
+
Genic
-1008
NZ_LR595896.1
1750159
1750171
ACGTCG
12
+
2
TCGACG
lpdA
1749247
1750677
+
Genic
-912
NZ_LR595896.1
1750802
1750814
ACGAGC
12
+
2
ACGAGC
UKMR15_RS07675
1750784
1751881
+
Genic
-18
NZ_LR595896.1
1751845
1751857
CCGCG
12
+
2
GCGCC
UKMR15_RS07675
1750784
1751881
+
Genic
-1061
NZ_LR595896.1
1752494
1752507
CCGCG
13
-
2
GCGCG
UKMR15_RS07680
1752076
1752486
+
Intergenic
-418
NZ_LR595896.1
1754077
1754089
AACCAG
12
-
2
TCTGGT
UKMR15_RS07690
1753425
1755080
-
Genic
-652
NZ_LR595896.1
1754737
1754749
AACGCG
12
+
2
CGAACG
UKMR15_RS07690
1753425
1755080
-
Genic
-1312
NZ_LR595896.1
1755033
1755045
ACGCGC
12
-
2
TGCGCG
UKMR15_RS07690
1753425
1755080
-
Genic
-1608
NZ_LR595896.1
1755574
1755586
ACGGCG
12
-
2
CCGTCG
UKMR15_RS07695
1755255
1756520
-
Genic
-319
NZ_LR595896.1
1755724
1755736
ACGGCG
12
+
2
GCGACG
UKMR15_RS07695
1755255
1756520
-
Genic
-469
NZ_LR595896.1
1757907
1757919
CCG
12
+
4
GCC
UKMR15_RS07700
1756570
1758171
-
Genic
-1337
NZ_LR595896.1
1757943
1757957
AGCGGC
14
-
2
GCTGCC
UKMR15_RS07700
1756570
1758171
-
Genic
-1373
NZ_LR595896.1
1757992
1758004
AGCCGG
12
+
2
GAGCCG
UKMR15_RS07700
1756570
1758171
-
Genic
-1422