Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2601 to 2625 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1719431
1719447
ACCGCC
16
+
2
CCGCCA
UKMR15_RS07545
1718306
1719502
-
Genic
-1125
NZ_LR595896.1
1720159
1720171
CCGCG
12
-
2
GCGCG
UKMR15_RS07550
1719513
1720004
-
Intergenic
-646
NZ_LR595896.1
1720176
1720189
ACGCGC
13
+
2
GCACGC
bamC
1720354
1721559
+
Intergenic
165
NZ_LR595896.1
1721138
1721150
AGCGGC
12
+
2
AGCGGC
bamC
1720354
1721559
+
Genic
-784
NZ_LR595896.1
1721306
1721319
ATCGCG
13
+
2
CGATCG
bamC
1720354
1721559
+
Genic
-952
NZ_LR595896.1
1722272
1722284
AAAATG
12
-
2
TTTCAT
UKMR15_RS07560
1722121
1722411
+
Genic
-151
NZ_LR595896.1
1722386
1722399
ACGCG
13
-
2
TCGCG
UKMR15_RS07560
1722121
1722411
+
Genic
-265
NZ_LR595896.1
1723897
1723909
ACGATC
12
+
2
ATCACG
UKMR15_RS07575
1723384
1724106
-
Genic
-513
NZ_LR595896.1
1723955
1723967
AGCGCG
12
+
2
GCGCGA
UKMR15_RS07575
1723384
1724106
-
Genic
-571
NZ_LR595896.1
1724446
1724460
CCCGCG
14
+
2
CGCGCC
UKMR15_RS07580
1724307
1724624
+
Genic
-139
NZ_LR595896.1
1727958
1727970
ACGGCG
12
+
2
CGGCGA
UKMR15_RS07605
1728820
1730484
+
Intergenic
850
NZ_LR595896.1
1727997
1728009
CCG
12
+
4
CGC
UKMR15_RS07605
1728820
1730484
+
Intergenic
811
NZ_LR595896.1
1729143
1729156
CCGCG
13
-
2
GGCGC
UKMR15_RS07605
1728820
1730484
+
Genic
-323
NZ_LR595896.1
1729696
1729708
AGCATC
12
-
2
TGCTGA
UKMR15_RS07605
1728820
1730484
+
Genic
-876
NZ_LR595896.1
1732060
1732072
ACATCG
12
+
2
ACATCG
nusA
1731247
1732722
+
Genic
-813
NZ_LR595896.1
1732339
1732351
ACGTCG
12
+
2
TCGACG
nusA
1731247
1732722
+
Genic
-1092
NZ_LR595896.1
1733350
1733362
CCG
12
-
4
GCG
infB
1732814
1735741
+
Genic
-536
NZ_LR595896.1
1733382
1733395
AGCCGC
13
-
2
GGCTGC
infB
1732814
1735741
+
Genic
-568
NZ_LR595896.1
1734795
1734808
AAGGGC
13
+
2
CAAGGG
infB
1732814
1735741
+
Genic
-1981
NZ_LR595896.1
1734974
1734986
CCCGCG
12
-
2
CGGGCG
infB
1732814
1735741
+
Genic
-2160
NZ_LR595896.1
1736720
1736734
AGCGCG
14
-
2
CGCGCT
truB
1736242
1737177
+
Genic
-478
NZ_LR595896.1
1737077
1737089
ACGCGC
12
-
2
GCGCGT
truB
1736242
1737177
+
Genic
-835
NZ_LR595896.1
1738253
1738267
AACGCG
14
+
2
GAACGC
UKMR15_RS07635
1737447
1739006
-
Genic
-806
NZ_LR595896.1
1738444
1738458
CCGCGG
14
+
2
CGGCCG
UKMR15_RS07635
1737447
1739006
-
Genic
-997
NZ_LR595896.1
1739656
1739668
CCG
12
-
4
GCG
UKMR15_RS07640
1739029
1740264
-
Genic
-627