Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2651 to 2675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1758090
1758102
AGAGGG
12
+
2
GGAGAG
UKMR15_RS07700
1756570
1758171
-
Genic
-1520
NZ_LR595896.1
1758314
1758326
CCCCG
12
-
2
GGGCG
UKMR15_RS07700
1756570
1758171
-
Intergenic
-1744
NZ_LR595896.1
1758380
1758392
AACGT
12
+
2
CGTAA
UKMR15_RS07700
1756570
1758171
-
Intergenic
-1810
NZ_LR595896.1
1759075
1759087
AGCCTC
12
-
2
GGCTGA
UKMR15_RS07710
1759089
1759589
+
Intergenic
2
NZ_LR595896.1
1759420
1759432
AGCGCG
12
-
2
CGCGCT
UKMR15_RS07710
1759089
1759589
+
Genic
-331
NZ_LR595896.1
1759505
1759517
CCGCG
12
+
2
CGCGC
UKMR15_RS07710
1759089
1759589
+
Genic
-416
NZ_LR595896.1
1760344
1760358
ACGCCG
14
+
2
GACGCC
cpaB
1760133
1761032
+
Genic
-211
NZ_LR595896.1
1760703
1760717
CCCGCG
14
-
2
CGGGCG
cpaB
1760133
1761032
+
Genic
-570
NZ_LR595896.1
1761387
1761400
CCGCG
13
-
2
GCGGC
UKMR15_RS07725
1761096
1762421
+
Genic
-291
NZ_LR595896.1
1761720
1761732
ACACCG
12
-
2
TGTCGG
UKMR15_RS07725
1761096
1762421
+
Genic
-624
NZ_LR595896.1
1761902
1761917
ACCGGC
15
-
2
CCGGTG
UKMR15_RS07725
1761096
1762421
+
Genic
-806
NZ_LR595896.1
1762050
1762062
ACGATC
12
+
2
CGATCA
UKMR15_RS07725
1761096
1762421
+
Genic
-954
NZ_LR595896.1
1762438
1762450
CG
12
+
6
CG
UKMR15_RS07725
1761096
1762421
+
Intergenic
-1342
NZ_LR595896.1
1763496
1763508
AGGCCG
12
-
2
GCCTCG
UKMR15_RS07730
1762488
1763726
+
Genic
-1008
NZ_LR595896.1
1763653
1763667
CCGCG
14
+
2
CGCCG
UKMR15_RS07730
1762488
1763726
+
Genic
-1165
NZ_LR595896.1
1765086
1765103
AGCGCG
17
-
2
GCGCTC
UKMR15_RS07740
1765066
1766073
+
Genic
-20
NZ_LR595896.1
1765231
1765243
CCGCGG
12
+
2
CGGCCG
UKMR15_RS07740
1765066
1766073
+
Genic
-165
NZ_LR595896.1
1766262
1766274
CCGCG
12
-
2
CGGCG
UKMR15_RS07740
1765066
1766073
+
Intergenic
-1196
NZ_LR595896.1
1767828
1767840
CCGCGG
12
+
2
CGCGGC
UKMR15_RS07750
1767125
1768060
+
Genic
-703
NZ_LR595896.1
1768001
1768017
CCGCGG
16
+
2
CGGCCG
UKMR15_RS07750
1767125
1768060
+
Genic
-876
NZ_LR595896.1
1768150
1768165
AGCGCG
15
-
2
GCGCTC
UKMR15_RS07750
1767125
1768060
+
Intergenic
-1025
NZ_LR595896.1
1768497
1768513
CCCG
16
+
4
CCGC
UKMR15_RS07760
1768469
1770277
+
Genic
-28
NZ_LR595896.1
1768510
1768523
CCCGCG
13
-
2
CGCGGG
UKMR15_RS07760
1768469
1770277
+
Genic
-41
NZ_LR595896.1
1768766
1768780
AGCGCG
14
-
2
CGCTCG
UKMR15_RS07760
1768469
1770277
+
Genic
-297
NZ_LR595896.1
1771449
1771461
ACGC
12
+
3
CGCA
UKMR15_RS07765
1770294
1771685
+
Genic
-1155