Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2701 to 2725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1788742
1788755
CCGCGG
13
+
2
GGCCGC
UKMR15_RS07840
1787136
1788848
+
Genic
-1606
NZ_LR595896.1
1789235
1789248
AAAAAG
13
+
2
GAAAAA
UKMR15_RS07850
1789273
1789359
-
Intergenic
25
NZ_LR595896.1
1789591
1789603
ACGGAT
12
-
2
GTATCC
rnr
1789584
1792022
+
Genic
-7
NZ_LR595896.1
1789830
1789842
ACGGCT
12
+
2
ACGGCT
rnr
1789584
1792022
+
Genic
-246
NZ_LR595896.1
1790117
1790130
ACG
13
-
4
GTC
rnr
1789584
1792022
+
Genic
-533
NZ_LR595896.1
1790213
1790226
AGATCG
13
+
2
GAGATC
rnr
1789584
1792022
+
Genic
-629
NZ_LR595896.1
1790491
1790503
ACGCCG
12
+
2
CGACGC
rnr
1789584
1792022
+
Genic
-907
NZ_LR595896.1
1790751
1790763
CCGCG
12
+
2
CGCGC
rnr
1789584
1792022
+
Genic
-1167
NZ_LR595896.1
1791378
1791392
CG
14
+
7
CG
rnr
1789584
1792022
+
Genic
-1794
NZ_LR595896.1
1791734
1791747
ACGCGC
13
-
2
CGCGTG
rnr
1789584
1792022
+
Genic
-2150
NZ_LR595896.1
1791848
1791861
CCCGCG
13
-
2
GCGGGC
rnr
1789584
1792022
+
Genic
-2264
NZ_LR595896.1
1792445
1792457
ACGAGC
12
-
2
TGCTCG
rlmB
1792154
1792897
+
Genic
-291
NZ_LR595896.1
1793092
1793105
CCCGCG
13
+
2
CCGCGC
UKMR15_RS07865
1792909
1793208
+
Genic
-183
NZ_LR595896.1
1793133
1793145
CCCGCG
12
-
2
GCGCGG
UKMR15_RS07865
1792909
1793208
+
Genic
-224
NZ_LR595896.1
1794214
1794227
ACGCCG
13
-
2
GCGTCG
UKMR15_RS07870
1793271
1794170
+
Intergenic
-943
NZ_LR595896.1
1794732
1794745
CCG
13
-
4
GGC
rpiA
1794439
1795134
+
Genic
-293
NZ_LR595896.1
1796037
1796050
AGCGCG
13
-
2
CGCGCT
UKMR15_RS07880
1795472
1796185
+
Genic
-565
NZ_LR595896.1
1796082
1796095
ACGCG
13
+
2
GCGAC
UKMR15_RS07880
1795472
1796185
+
Genic
-610
NZ_LR595896.1
1797823
1797835
ACCGTC
12
-
2
CGGTGA
UKMR15_RS07890
1797669
1798328
-
Genic
-154
NZ_LR595896.1
1798206
1798219
AGCGCG
13
+
2
AGCGCG
UKMR15_RS07890
1797669
1798328
-
Genic
-537
NZ_LR595896.1
1798774
1798786
ACATGG
12
-
2
CCATGT
UKMR15_RS07895
1798458
1799252
-
Genic
-316
NZ_LR595896.1
1800095
1800107
CCCGCG
12
-
2
CGCGGG
UKMR15_RS07900
1799372
1800400
-
Genic
-723
NZ_LR595896.1
1800148
1800162
AAGCCG
14
+
2
GAAGCC
UKMR15_RS07900
1799372
1800400
-
Genic
-776
NZ_LR595896.1
1800692
1800704
AGGCGC
12
+
2
GCAGGC
UKMR15_RS07905
1800505
1801335
-
Genic
-187
NZ_LR595896.1
1803518
1803530
AGCGCG
12
-
2
TCGCGC
UKMR15_RS07925
1803410
1803907
+
Genic
-108