Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2576 to 2600 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1699895
1699909
ACGTCG
14
+
2
CGACGT
UKMR15_RS07460
1699480
1700385
+
Genic
-415
NZ_LR595896.1
1700729
1700741
ACCGTC
12
-
2
GTGACG
UKMR15_RS07465
1700387
1701313
+
Genic
-342
NZ_LR595896.1
1700883
1700895
ACGGCT
12
-
2
CGTAGC
UKMR15_RS07465
1700387
1701313
+
Genic
-496
NZ_LR595896.1
1701387
1701399
CCG
12
-
4
GCG
UKMR15_RS07465
1700387
1701313
+
Intergenic
-1000
NZ_LR595896.1
1701544
1701559
ATCGGC
15
+
2
TCGGCA
UKMR15_RS07470
1701481
1702617
+
Genic
-63
NZ_LR595896.1
1701929
1701942
CCGCGG
13
+
2
CGGCCG
UKMR15_RS07470
1701481
1702617
+
Genic
-448
NZ_LR595896.1
1702226
1702242
ACAGCG
16
-
2
GTCGCT
UKMR15_RS07470
1701481
1702617
+
Genic
-745
NZ_LR595896.1
1702565
1702578
ATCGCG
13
+
2
GATCGC
UKMR15_RS07470
1701481
1702617
+
Genic
-1084
NZ_LR595896.1
1703013
1703025
ACC
12
-
4
GGT
UKMR15_RS07475
1702691
1703044
+
Genic
-322
NZ_LR595896.1
1703275
1703287
AGCGCG
12
-
2
TCGCGC
UKMR15_RS07480
1703089
1705326
+
Genic
-186
NZ_LR595896.1
1704002
1704014
AAGCCG
12
+
2
GCCGAA
UKMR15_RS07480
1703089
1705326
+
Genic
-913
NZ_LR595896.1
1706901
1706913
ACGCGC
12
-
2
TGCGCG
thrS
1705785
1707692
+
Genic
-1116
NZ_LR595896.1
1707759
1707771
ATCGC
12
+
2
TCGCA
infC
1707742
1708266
+
Genic
-17
NZ_LR595896.1
1708147
1708159
ATGCGC
12
+
2
GCATGC
infC
1707742
1708266
+
Genic
-405
NZ_LR595896.1
1709262
1709274
AACGAG
12
+
2
CGAGAA
pheS
1709195
1710208
+
Genic
-67
NZ_LR595896.1
1710030
1710042
AACCGG
12
-
2
TTCCGG
pheS
1709195
1710208
+
Genic
-835
NZ_LR595896.1
1711622
1711634
ACGGCG
12
+
2
GCGACG
UKMR15_RS07515
1710296
1712728
+
Genic
-1326
NZ_LR595896.1
1711646
1711658
CCG
12
+
4
CGC
UKMR15_RS07515
1710296
1712728
+
Genic
-1350
NZ_LR595896.1
1711669
1711681
AGATCG
12
+
2
ATCGAG
UKMR15_RS07515
1710296
1712728
+
Genic
-1373
NZ_LR595896.1
1712001
1712014
ACGCGC
13
-
2
GCGCGT
UKMR15_RS07515
1710296
1712728
+
Genic
-1705
NZ_LR595896.1
1712842
1712856
AGCGC
14
+
2
GCGCA
UKMR15_RS07520
1712801
1713205
+
Genic
-41
NZ_LR595896.1
1713550
1713562
AGCCCG
12
+
2
GCCCGA
UKMR15_RS07525
1713264
1713668
+
Genic
-286
NZ_LR595896.1
1713815
1713827
ACGTCG
12
+
2
CGACGT
UKMR15_RS07530
1713790
1715910
-
Genic
-25
NZ_LR595896.1
1714715
1714727
CCGCG
12
+
2
GCGCC
UKMR15_RS07530
1713790
1715910
-
Genic
-925
NZ_LR595896.1
1718724
1718736
ATCGGC
12
-
2
TGCCGA
UKMR15_RS07545
1718306
1719502
-
Genic
-418