Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2551 to 2575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1678128
1678144
AGCGCG
16
+
2
AGCGCG
UKMR15_RS07365
1677840
1678289
-
Genic
-288
NZ_LR595896.1
1678831
1678843
AGCGCG
12
+
2
CGCGAG
wrbA
1678286
1678894
-
Genic
-545
NZ_LR595896.1
1678958
1678970
CCGCG
12
+
2
GCCGC
UKMR15_RS07375
1679000
1680313
+
Intergenic
30
NZ_LR595896.1
1679273
1679285
AAGGCG
12
+
2
CGAAGG
UKMR15_RS07375
1679000
1680313
+
Genic
-273
NZ_LR595896.1
1679327
1679342
ATC
15
-
5
TGA
UKMR15_RS07375
1679000
1680313
+
Genic
-327
NZ_LR595896.1
1680042
1680055
CCGCG
13
+
2
CGCCG
UKMR15_RS07375
1679000
1680313
+
Genic
-1042
NZ_LR595896.1
1680417
1680429
CCCCCG
12
-
2
GGGGCG
UKMR15_RS07380
1680530
1680850
-
Intergenic
101
NZ_LR595896.1
1683353
1683368
CG
15
+
7
CG
UKMR15_RS07390
1681631
1683565
+
Genic
-1722
NZ_LR595896.1
1683723
1683735
CCGCGG
12
+
2
GCCGCG
UKMR15_RS07390
1681631
1683565
+
Intergenic
-2092
NZ_LR595896.1
1683797
1683810
CCGCG
13
+
2
CGCCG
aroC
1683930
1685039
+
Intergenic
120
NZ_LR595896.1
1684053
1684066
AGCTCG
13
+
2
AGCTCG
aroC
1683930
1685039
+
Genic
-123
NZ_LR595896.1
1684333
1684345
CCGGCG
12
+
2
CGGCGC
aroC
1683930
1685039
+
Genic
-403
NZ_LR595896.1
1685132
1685144
AAAACG
12
+
2
AAAACG
UKMR15_RS07400
1685191
1686560
-
Intergenic
47
NZ_LR595896.1
1688064
1688076
AACAGG
12
+
2
CAGGAA
UKMR15_RS07405
1686688
1688361
-
Genic
-1376
NZ_LR595896.1
1689103
1689115
AACGTC
12
+
2
TCAACG
UKMR15_RS07410
1688542
1689321
+
Genic
-561
NZ_LR595896.1
1691542
1691554
CCG
12
+
4
CGC
UKMR15_RS07420
1690175
1691248
-
Intergenic
-1367
NZ_LR595896.1
1693915
1693927
CCGCG
12
-
2
GCGGC
UKMR15_RS07425
1692177
1693709
-
Intergenic
-1738
NZ_LR595896.1
1694456
1694469
AGCGCG
13
-
2
CTCGCG
UKMR15_RS07430
1694301
1694846
-
Genic
-155
NZ_LR595896.1
1695377
1695389
AGCTCG
12
+
2
CTCGAG
UKMR15_RS07435
1695099
1695803
+
Genic
-278
NZ_LR595896.1
1696292
1696304
ACGCCC
12
-
2
GGGCGT
UKMR15_RS07440
1695805
1696446
+
Genic
-487
NZ_LR595896.1
1697144
1697158
AGCGCG
14
-
2
CGCGCT
UKMR15_RS07445
1696854
1697576
-
Genic
-290
NZ_LR595896.1
1698046
1698058
AACTGC
12
-
2
CAGTTG
UKMR15_RS07450
1697620
1698720
-
Genic
-426
NZ_LR595896.1
1698427
1698442
AGATCG
15
+
2
ATCGAG
UKMR15_RS07450
1697620
1698720
-
Genic
-807
NZ_LR595896.1
1698574
1698586
CCCGG
12
+
2
GCCCG
UKMR15_RS07450
1697620
1698720
-
Genic
-954
NZ_LR595896.1
1699566
1699578
ACAGCG
12
-
2
CTGTCG
UKMR15_RS07460
1699480
1700385
+
Genic
-86