Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2501 to 2525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1645828
1645840
CCGCGG
12
+
2
CGGCCG
UKMR15_RS07240
1645587
1646732
-
Genic
-241
NZ_LR595896.1
1646342
1646355
AACGCG
13
+
2
CGCGAA
UKMR15_RS07240
1645587
1646732
-
Genic
-755
NZ_LR595896.1
1647020
1647032
ATCGCG
12
+
2
TCGCGA
UKMR15_RS07245
1646833
1647882
-
Genic
-187
NZ_LR595896.1
1647411
1647424
AAGGCG
13
-
2
CGCCTT
UKMR15_RS07245
1646833
1647882
-
Genic
-578
NZ_LR595896.1
1647739
1647752
AATCGG
13
+
2
GAATCG
UKMR15_RS07245
1646833
1647882
-
Genic
-906
NZ_LR595896.1
1648883
1648896
AACGCG
13
-
2
CGCGTT
UKMR15_RS07250
1648168
1649007
+
Genic
-715
NZ_LR595896.1
1649619
1649633
CCCGCG
14
-
2
CGCGGG
iolG
1649000
1650019
+
Genic
-619
NZ_LR595896.1
1649696
1649709
CCGCG
13
+
2
CGCGC
iolG
1649000
1650019
+
Genic
-696
NZ_LR595896.1
1650062
1650074
ATCGGC
12
+
2
GCATCG
UKMR15_RS07260
1650032
1651069
+
Genic
-30
NZ_LR595896.1
1651570
1651584
CCGCG
14
+
2
CGCGC
UKMR15_RS07265
1651234
1651464
+
Intergenic
-336
NZ_LR595896.1
1651654
1651669
CCGCG
15
+
3
CGCGC
UKMR15_RS07270
1651740
1652126
+
Intergenic
71
NZ_LR595896.1
1651792
1651807
AGCGCG
15
+
2
GCGCGA
UKMR15_RS07270
1651740
1652126
+
Genic
-52
NZ_LR595896.1
1652592
1652604
ACGAGC
12
-
2
TGCTCG
UKMR15_RS07275
1652454
1653158
+
Genic
-138
NZ_LR595896.1
1653106
1653121
ACGGCT
15
+
2
CTACGG
UKMR15_RS07275
1652454
1653158
+
Genic
-652
NZ_LR595896.1
1653370
1653382
ACCGGC
12
-
2
GTGCCG
UKMR15_RS07280
1653155
1654519
+
Genic
-215
NZ_LR595896.1
1653512
1653524
ACGGCG
12
-
2
CCGTCG
UKMR15_RS07280
1653155
1654519
+
Genic
-357
NZ_LR595896.1
1654990
1655003
CCCGCG
13
-
2
CGCGGG
UKMR15_RS07285
1654530
1656923
+
Genic
-460
NZ_LR595896.1
1655299
1655311
ACGATC
12
-
2
GATCGT
UKMR15_RS07285
1654530
1656923
+
Genic
-769
NZ_LR595896.1
1655595
1655607
ACAGCC
12
-
2
GGCTGT
UKMR15_RS07285
1654530
1656923
+
Genic
-1065
NZ_LR595896.1
1656142
1656154
ACGCT
12
+
2
GCTAC
UKMR15_RS07285
1654530
1656923
+
Genic
-1612
NZ_LR595896.1
1656498
1656511
AGGCGC
13
+
2
CGCAGG
UKMR15_RS07285
1654530
1656923
+
Genic
-1968
NZ_LR595896.1
1656515
1656527
ATCCGC
12
+
2
CGCATC
UKMR15_RS07285
1654530
1656923
+
Genic
-1985
NZ_LR595896.1
1657630
1657642
CCCGG
12
-
2
CGGGC
UKMR15_RS07290
1657012
1657629
+
Intergenic
-618
NZ_LR595896.1
1657892
1657904
CCCGCG
12
+
2
CGCCCG
galU
1657690
1658571
-
Genic
-202
NZ_LR595896.1
1658896
1658908
ATCGCG
12
+
2
CGATCG
UKMR15_RS07300
1658658
1661525
-
Genic
-238