Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2476 to 2500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1626225
1626238
CCCGCG
13
+
2
CGCCCG
UKMR15_RS07160
1625963
1626928
-
Genic
-262
NZ_LR595896.1
1626704
1626716
AGCGCG
12
+
2
GCGAGC
UKMR15_RS07160
1625963
1626928
-
Genic
-741
NZ_LR595896.1
1627548
1627561
ATCCCG
13
-
2
GGGATC
UKMR15_RS07160
1625963
1626928
-
Intergenic
-1585
NZ_LR595896.1
1629319
1629332
AAGGCG
13
+
2
GGCGAA
UKMR15_RS07170
1629204
1630760
+
Genic
-115
NZ_LR595896.1
1629407
1629419
ACGCTC
12
-
2
AGCGTG
UKMR15_RS07170
1629204
1630760
+
Genic
-203
NZ_LR595896.1
1630245
1630257
CCG
12
-
4
CGG
UKMR15_RS07170
1629204
1630760
+
Genic
-1041
NZ_LR595896.1
1631769
1631781
CCGCG
12
-
2
CGGCG
UKMR15_RS07175
1630979
1631656
-
Intergenic
-790
NZ_LR595896.1
1633306
1633318
AGGCCG
12
-
2
CTCGGC
UKMR15_RS07190
1633151
1634299
+
Genic
-155
NZ_LR595896.1
1633599
1633611
AGGATC
12
-
2
GATCCT
UKMR15_RS07190
1633151
1634299
+
Genic
-448
NZ_LR595896.1
1636186
1636200
AGCGGC
14
-
2
CTGCCG
UKMR15_RS07205
1635923
1638226
+
Genic
-263
NZ_LR595896.1
1636427
1636439
ACGCAT
12
-
2
ATGCGT
UKMR15_RS07205
1635923
1638226
+
Genic
-504
NZ_LR595896.1
1636622
1636634
ACGCTG
12
+
2
CGCTGA
UKMR15_RS07205
1635923
1638226
+
Genic
-699
NZ_LR595896.1
1636930
1636943
CCCGCG
13
-
2
GGCGCG
UKMR15_RS07205
1635923
1638226
+
Genic
-1007
NZ_LR595896.1
1637678
1637690
CCG
12
-
4
GGC
UKMR15_RS07205
1635923
1638226
+
Genic
-1755
NZ_LR595896.1
1637830
1637842
CCGCGG
12
+
2
GCCGCG
UKMR15_RS07205
1635923
1638226
+
Genic
-1907
NZ_LR595896.1
1637949
1637962
AGCGCG
13
-
2
GCTCGC
UKMR15_RS07205
1635923
1638226
+
Genic
-2026
NZ_LR595896.1
1638650
1638664
AGCGCG
14
-
2
GCTCGC
UKMR15_RS07210
1638223
1638927
+
Genic
-427
NZ_LR595896.1
1639005
1639018
CCGCG
13
-
2
GCGCG
iolB
1639044
1639847
-
Intergenic
26
NZ_LR595896.1
1640086
1640098
AACCGC
12
-
2
GTTGCG
iolE
1639847
1640767
-
Genic
-239
NZ_LR595896.1
1641678
1641690
AACGCG
12
-
2
CGCGTT
iolD
1640764
1642749
-
Genic
-914
NZ_LR595896.1
1642025
1642038
CCCGCG
13
-
2
CGGGCG
iolD
1640764
1642749
-
Genic
-1261
NZ_LR595896.1
1642322
1642334
AGC
12
+
4
GCA
iolD
1640764
1642749
-
Genic
-1558
NZ_LR595896.1
1642586
1642600
ACGGCG
14
-
2
CGTCGC
iolD
1640764
1642749
-
Genic
-1822
NZ_LR595896.1
1643189
1643202
CCGCG
13
-
2
GCGCG
iolC
1642760
1644760
-
Genic
-429
NZ_LR595896.1
1644470
1644482
ACACCG
12
-
2
TCGGTG
iolC
1642760
1644760
-
Genic
-1710