Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2426 to 2450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1595270
1595282
ACGTCG
12
+
2
TCGACG
UKMR15_RS07055
1595034
1595594
+
Genic
-236
NZ_LR595896.1
1595363
1595375
ACGGGC
12
+
2
GGCACG
UKMR15_RS07055
1595034
1595594
+
Genic
-329
NZ_LR595896.1
1596160
1596172
ACCGAT
12
+
2
ATACCG
UKMR15_RS07060
1595671
1596195
+
Genic
-489
NZ_LR595896.1
1596257
1596271
AGCGC
14
-
2
GCGCT
UKMR15_RS07065
1596213
1597052
+
Genic
-44
NZ_LR595896.1
1596310
1596323
ACGCGC
13
+
2
GCACGC
UKMR15_RS07065
1596213
1597052
+
Genic
-97
NZ_LR595896.1
1596969
1596982
AATTCC
13
+
2
ATTCCA
UKMR15_RS07065
1596213
1597052
+
Genic
-756
NZ_LR595896.1
1598297
1598310
ATCGGC
13
+
2
TCGGCA
UKMR15_RS07070
1597097
1599508
+
Genic
-1200
NZ_LR595896.1
1598914
1598926
ACGGCT
12
+
2
TACGGC
UKMR15_RS07070
1597097
1599508
+
Genic
-1817
NZ_LR595896.1
1599563
1599575
AGCGCG
12
-
2
CGCTCG
UKMR15_RS07075
1599524
1600489
+
Genic
-39
NZ_LR595896.1
1601437
1601452
AGCCGC
15
-
2
TGCGGC
UKMR15_RS07080
1600900
1602981
+
Genic
-537
NZ_LR595896.1
1601565
1601578
ACGCGC
13
-
2
GTGCGC
UKMR15_RS07080
1600900
1602981
+
Genic
-665
NZ_LR595896.1
1603472
1603484
ACGATG
12
+
2
GATGAC
UKMR15_RS07085
1602982
1603614
+
Genic
-490
NZ_LR595896.1
1603529
1603541
AAGCAC
12
+
2
GCACAA
UKMR15_RS07085
1602982
1603614
+
Genic
-547
NZ_LR595896.1
1603978
1603991
CCCGCG
13
-
2
GCGGGC
UKMR15_RS07090
1603918
1605627
-
Genic
-60
NZ_LR595896.1
1604301
1604313
AGGCGC
12
-
2
CGCCTG
UKMR15_RS07090
1603918
1605627
-
Genic
-383
NZ_LR595896.1
1604491
1604503
ACGCCG
12
+
2
ACGCCG
UKMR15_RS07090
1603918
1605627
-
Genic
-573
NZ_LR595896.1
1605080
1605093
CCCGCG
13
+
2
CCGCGC
UKMR15_RS07090
1603918
1605627
-
Genic
-1162
NZ_LR595896.1
1605201
1605215
AGCGCG
14
-
2
GCTCGC
UKMR15_RS07090
1603918
1605627
-
Genic
-1283
NZ_LR595896.1
1605366
1605378
ACCCGG
12
-
2
CGGGTC
UKMR15_RS07090
1603918
1605627
-
Genic
-1448
NZ_LR595896.1
1606504
1606517
ACGAGG
13
-
2
GTCCTC
UKMR15_RS07095
1605629
1607248
-
Genic
-875
NZ_LR595896.1
1607188
1607202
AACGGC
14
-
2
GCCGTT
UKMR15_RS07095
1605629
1607248
-
Genic
-1559
NZ_LR595896.1
1607402
1607415
ACGGCG
13
-
2
TCGCCG
UKMR15_RS07100
1607430
1608617
-
Intergenic
15
NZ_LR595896.1
1608101
1608117
AGGCGC
16
-
2
CTGCGC
UKMR15_RS07100
1607430
1608617
-
Genic
-671
NZ_LR595896.1
1608176
1608188
AGGCGC
12
-
2
CTGCGC
UKMR15_RS07100
1607430
1608617
-
Genic
-746
NZ_LR595896.1
1608760
1608772
CCGCG
12
+
2
GCCGC
UKMR15_RS07100
1607430
1608617
-
Intergenic
-1330