Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2401 to 2425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1573718
1573733
AACCCG
15
+
2
CCCGAA
UKMR15_RS06970
1571658
1574066
+
Genic
-2060
NZ_LR595896.1
1574004
1574016
ATGCGC
12
+
2
GCATGC
UKMR15_RS06970
1571658
1574066
+
Genic
-2346
NZ_LR595896.1
1574140
1574153
AGCGCG
13
+
2
CGAGCG
UKMR15_RS06975
1574175
1577510
+
Intergenic
22
NZ_LR595896.1
1574385
1574397
CCCGCG
12
-
2
CGGGCG
UKMR15_RS06975
1574175
1577510
+
Genic
-210
NZ_LR595896.1
1574524
1574537
ACGTCG
13
+
2
CGTCGA
UKMR15_RS06975
1574175
1577510
+
Genic
-349
NZ_LR595896.1
1576971
1576983
ACCGTG
12
-
2
CGGTCA
UKMR15_RS06975
1574175
1577510
+
Genic
-2796
NZ_LR595896.1
1577011
1577023
AGATCG
12
+
2
CGAGAT
UKMR15_RS06975
1574175
1577510
+
Genic
-2836
NZ_LR595896.1
1578095
1578107
ACGATG
12
+
2
ACGATG
UKMR15_RS06980
1578296
1578835
+
Intergenic
189
NZ_LR595896.1
1579570
1579584
CCGCG
14
+
2
CGCCG
UKMR15_RS06990
1579328
1579633
+
Genic
-242
NZ_LR595896.1
1581166
1581178
ACCCC
12
-
2
TGGGG
vgrG
1579646
1582486
+
Genic
-1520
NZ_LR595896.1
1581275
1581288
ACGCGC
13
+
2
ACGCGC
vgrG
1579646
1582486
+
Genic
-1629
NZ_LR595896.1
1581393
1581406
AGCATG
13
+
2
CATGAG
vgrG
1579646
1582486
+
Genic
-1747
NZ_LR595896.1
1581737
1581749
ACCGC
12
-
2
GCGGT
vgrG
1579646
1582486
+
Genic
-2091
NZ_LR595896.1
1581773
1581787
ACGCCG
14
-
2
CGGCGT
vgrG
1579646
1582486
+
Genic
-2127
NZ_LR595896.1
1582191
1582204
AGCGCG
13
+
2
GAGCGC
vgrG
1579646
1582486
+
Genic
-2545
NZ_LR595896.1
1582918
1582931
ACGCCC
13
-
2
GGCGTG
UKMR15_RS07000
1582488
1583363
+
Genic
-430
NZ_LR595896.1
1584327
1584339
AGCGC
12
+
2
GCAGC
UKMR15_RS07005
1583360
1586203
+
Genic
-967
NZ_LR595896.1
1584515
1584527
ACGCTG
12
+
2
CGCTGA
UKMR15_RS07005
1583360
1586203
+
Genic
-1155
NZ_LR595896.1
1586497
1586509
AATGCC
12
+
2
ATGCCA
UKMR15_RS07010
1586321
1587241
+
Genic
-176
NZ_LR595896.1
1587775
1587788
AAAAAT
13
-
2
TTTTTA
UKMR15_RS07015
1587787
1588080
+
Genic
-1
NZ_LR595896.1
1588923
1588935
AGCGGC
12
+
2
GCGGCA
UKMR15_RS07020
1588713
1588982
+
Genic
-210
NZ_LR595896.1
1589293
1589306
CCGCGG
13
+
2
GCGGCC
UKMR15_RS07025
1589246
1589527
-
Genic
-47
NZ_LR595896.1
1591072
1591084
CG
12
+
6
CG
UKMR15_RS07035
1591023
1592282
-
Genic
-49
NZ_LR595896.1
1591588
1591600
ACGCCG
12
+
2
CGCCGA
UKMR15_RS07035
1591023
1592282
-
Genic
-565
NZ_LR595896.1
1594232
1594244
AATCCG
12
+
2
CCGAAT
UKMR15_RS07045
1593957
1594178
+
Intergenic
-275