Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2451 to 2475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1608838
1608852
ACGGAG
14
-
2
TCCGTC
UKMR15_RS07100
1607430
1608617
-
Intergenic
-1408
NZ_LR595896.1
1610005
1610018
CCGCG
13
-
2
GCGCG
UKMR15_RS07105
1609241
1610434
-
Genic
-764
NZ_LR595896.1
1610232
1610245
CCCGCG
13
+
2
CCGCGC
UKMR15_RS07105
1609241
1610434
-
Genic
-991
NZ_LR595896.1
1610515
1610528
CCCCG
13
-
2
GGGGC
UKMR15_RS07105
1609241
1610434
-
Intergenic
-1274
NZ_LR595896.1
1612565
1612578
CCCGCG
13
-
2
CGGGCG
UKMR15_RS07115
1612448
1613863
+
Genic
-117
NZ_LR595896.1
1613876
1613888
CCCGCG
12
-
2
GCGCGG
UKMR15_RS07115
1612448
1613863
+
Intergenic
-1428
NZ_LR595896.1
1615471
1615483
ACGTCG
12
+
2
GACGTC
UKMR15_RS07125
1614869
1616968
+
Genic
-602
NZ_LR595896.1
1616264
1616276
AGCGGC
12
-
2
CGCTGC
UKMR15_RS07125
1614869
1616968
+
Genic
-1395
NZ_LR595896.1
1617329
1617341
ACGCGC
12
+
2
CGCGCA
UKMR15_RS07130
1617256
1617642
+
Genic
-73
NZ_LR595896.1
1617969
1617982
ACGTGC
13
+
2
TGCACG
UKMR15_RS07135
1617661
1618143
+
Genic
-308
NZ_LR595896.1
1618905
1618917
ACGGCT
12
-
2
CGTAGC
UKMR15_RS07140
1618487
1620196
-
Genic
-418
NZ_LR595896.1
1619614
1619627
AACATG
13
-
2
CATGTT
UKMR15_RS07140
1618487
1620196
-
Genic
-1127
NZ_LR595896.1
1619736
1619748
ACGGCG
12
+
2
ACGGCG
UKMR15_RS07140
1618487
1620196
-
Genic
-1249
NZ_LR595896.1
1620301
1620314
CCGCG
13
-
2
GCGGC
UKMR15_RS07140
1618487
1620196
-
Intergenic
-1814
NZ_LR595896.1
1620559
1620573
AACGC
14
+
2
ACGCA
UKMR15_RS07145
1620446
1620685
+
Genic
-113
NZ_LR595896.1
1620721
1620734
CCCGCG
13
-
2
GCGGGC
UKMR15_RS07145
1620446
1620685
+
Intergenic
-275
NZ_LR595896.1
1621168
1621180
AGCGCG
12
-
2
TCGCGC
UKMR15_RS07150
1621014
1622234
-
Genic
-154
NZ_LR595896.1
1621413
1621425
CCCG
12
+
3
CGCC
UKMR15_RS07150
1621014
1622234
-
Genic
-399
NZ_LR595896.1
1622998
1623011
AGCGC
13
+
2
GCGCA
alaS
1622813
1625437
+
Genic
-185
NZ_LR595896.1
1625869
1625882
ACGTC
13
+
2
ACGTC
UKMR15_RS07160
1625963
1626928
-
Intergenic
81
NZ_LR595896.1
1625883
1625895
ACCGCG
12
+
2
CGACCG
UKMR15_RS07160
1625963
1626928
-
Intergenic
68
NZ_LR595896.1
1625907
1625934
ACCGTG
27
+
4
GACCGT
UKMR15_RS07160
1625963
1626928
-
Intergenic
29
NZ_LR595896.1
1625987
1626000
CCGCG
13
+
2
GCGCC
UKMR15_RS07160
1625963
1626928
-
Genic
-24
NZ_LR595896.1
1626056
1626068
CCG
12
-
4
GCG
UKMR15_RS07160
1625963
1626928
-
Genic
-93
NZ_LR595896.1
1626214
1626226
ACCGCG
12
+
2
CGCGAC
UKMR15_RS07160
1625963
1626928
-
Genic
-251