Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2376 to 2400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1555884
1555900
CCGCGG
16
+
2
CGCGGC
UKMR15_RS06895
1555367
1555711
+
Intergenic
-517
NZ_LR595896.1
1556314
1556326
ACACCG
12
-
2
GTGTCG
UKMR15_RS06900
1556170
1556403
-
Genic
-144
NZ_LR595896.1
1556370
1556383
AGCGCG
13
+
2
CGCGAG
UKMR15_RS06900
1556170
1556403
-
Genic
-200
NZ_LR595896.1
1557261
1557273
CCGGCG
12
+
2
GCGCCG
UKMR15_RS06910
1557044
1557532
-
Genic
-217
NZ_LR595896.1
1557431
1557443
ACGGC
12
-
2
CGTGC
UKMR15_RS06910
1557044
1557532
-
Genic
-387
NZ_LR595896.1
1558886
1558900
CCG
14
+
4
CGC
UKMR15_RS06915
1557559
1559961
-
Genic
-1327
NZ_LR595896.1
1561431
1561444
AACGGC
13
+
2
CGGCAA
UKMR15_RS06920
1560492
1561328
+
Intergenic
-939
NZ_LR595896.1
1561449
1561462
AACGGC
13
+
2
CGGCAA
UKMR15_RS06920
1560492
1561328
+
Intergenic
-957
NZ_LR595896.1
1561457
1561471
AACAGC
14
+
2
GCAACA
UKMR15_RS06920
1560492
1561328
+
Intergenic
-965
NZ_LR595896.1
1561466
1561480
ACAGCG
14
+
2
ACAGCG
UKMR15_RS06920
1560492
1561328
+
Intergenic
-974
NZ_LR595896.1
1561550
1561564
AGCGCG
14
+
2
CGCGAG
UKMR15_RS06920
1560492
1561328
+
Intergenic
-1058
NZ_LR595896.1
1562180
1562192
ACGC
12
-
3
TGCG
tssF
1562631
1564481
+
Intergenic
439
NZ_LR595896.1
1562934
1562946
CCGCG
12
+
2
GCCGC
tssF
1562631
1564481
+
Genic
-303
NZ_LR595896.1
1564135
1564149
CCGGCG
14
+
2
CGGCGC
tssF
1562631
1564481
+
Genic
-1504
NZ_LR595896.1
1564402
1564415
ACGAGC
13
-
2
GCTCGT
tssF
1562631
1564481
+
Genic
-1771
NZ_LR595896.1
1564551
1564563
CCCGCG
12
-
2
GGCGCG
UKMR15_RS06935
1564509
1565924
-
Genic
-42
NZ_LR595896.1
1564642
1564654
ACGGCG
12
+
2
CGGCGA
UKMR15_RS06935
1564509
1565924
-
Genic
-133
NZ_LR595896.1
1564669
1564681
CCGCG
12
+
2
GCGCC
UKMR15_RS06935
1564509
1565924
-
Genic
-160
NZ_LR595896.1
1566143
1566156
CCGCGG
13
+
2
GCCGCG
UKMR15_RS06940
1565948
1566214
-
Genic
-195
NZ_LR595896.1
1566575
1566587
AATCG
12
+
2
CGAAT
UKMR15_RS06950
1566734
1569541
+
Intergenic
147
NZ_LR595896.1
1566900
1566913
ACCTCG
13
+
2
CCTCGA
UKMR15_RS06950
1566734
1569541
+
Genic
-166
NZ_LR595896.1
1567238
1567250
AAATCG
12
-
2
ATTTCG
UKMR15_RS06950
1566734
1569541
+
Genic
-504
NZ_LR595896.1
1567449
1567462
ACAGCG
13
-
2
GTCGCT
UKMR15_RS06950
1566734
1569541
+
Genic
-715
NZ_LR595896.1
1567917
1567930
CCGCG
13
+
2
CGCCG
UKMR15_RS06950
1566734
1569541
+
Genic
-1183
NZ_LR595896.1
1569740
1569752
ACGGCG
12
+
2
CGACGG
UKMR15_RS06955
1569544
1570377
+
Genic
-196