Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2326 to 2350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1523554
1523568
AGGCCG
14
-
2
GCCTCG
malQ
1523164
1525386
-
Genic
-390
NZ_LR595896.1
1523608
1523621
AGGCGG
13
+
2
GAGGCG
malQ
1523164
1525386
-
Genic
-444
NZ_LR595896.1
1524143
1524155
ATCGC
12
+
2
GCATC
malQ
1523164
1525386
-
Genic
-979
NZ_LR595896.1
1524225
1524237
CCGCGG
12
+
2
GCCGCG
malQ
1523164
1525386
-
Genic
-1061
NZ_LR595896.1
1524305
1524319
ACGCGC
14
-
2
CGTGCG
malQ
1523164
1525386
-
Genic
-1141
NZ_LR595896.1
1524786
1524798
CCGCG
12
+
2
CGCGC
malQ
1523164
1525386
-
Genic
-1622
NZ_LR595896.1
1525457
1525469
CCGCG
12
+
2
GCCGC
treZ
1525383
1527287
-
Genic
-74
NZ_LR595896.1
1525717
1525729
CG
12
+
6
GC
treZ
1525383
1527287
-
Genic
-334
NZ_LR595896.1
1526043
1526055
AGCGCG
12
+
2
AGCGCG
treZ
1525383
1527287
-
Genic
-660
NZ_LR595896.1
1526613
1526625
ACCGCG
12
-
2
TCGCGG
treZ
1525383
1527287
-
Genic
-1230
NZ_LR595896.1
1526706
1526718
AGCCCG
12
+
2
AGCCCG
treZ
1525383
1527287
-
Genic
-1323
NZ_LR595896.1
1527122
1527135
CCG
13
+
4
GCC
treZ
1525383
1527287
-
Genic
-1739
NZ_LR595896.1
1527486
1527498
AGCATC
12
+
2
TCAGCA
glgX
1527314
1529422
-
Genic
-172
NZ_LR595896.1
1530674
1530687
ACGCGC
13
-
2
CGCGTG
glgB
1529475
1531691
-
Genic
-1199
NZ_LR595896.1
1530956
1530969
CG
13
+
6
CG
glgB
1529475
1531691
-
Genic
-1481
NZ_LR595896.1
1531294
1531306
CG
12
+
6
GC
glgB
1529475
1531691
-
Genic
-1819
NZ_LR595896.1
1531707
1531719
CCGCG
12
-
2
GCGGC
treS
1531688
1535083
-
Genic
-19
NZ_LR595896.1
1532507
1532519
ACGCCG
12
-
2
GCGTCG
treS
1531688
1535083
-
Genic
-819
NZ_LR595896.1
1532907
1532919
CCCGCG
12
+
2
CCGCGC
treS
1531688
1535083
-
Genic
-1219
NZ_LR595896.1
1533003
1533017
AGCGCG
14
+
2
GCGCGA
treS
1531688
1535083
-
Genic
-1315
NZ_LR595896.1
1534198
1534210
ACGAGG
12
-
2
CTCGTC
treS
1531688
1535083
-
Genic
-2510
NZ_LR595896.1
1534800
1534812
CCGCG
12
-
2
CGCGG
treS
1531688
1535083
-
Genic
-3112
NZ_LR595896.1
1535006
1535018
CCGCG
12
-
2
GCGCG
treS
1531688
1535083
-
Genic
-3318
NZ_LR595896.1
1535354
1535368
ACG
14
+
4
CGA
UKMR15_RS06815
1535080
1538427
-
Genic
-274
NZ_LR595896.1
1538744
1538757
CCGCG
13
+
2
CGCCG
UKMR15_RS06820
1539005
1540483
-
Intergenic
248