Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2301 to 2325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1493098
1493110
CCG
12
+
4
CGC
UKMR15_RS06630
1492447
1493265
+
Genic
-651
NZ_LR595896.1
1494929
1494941
ACGCG
12
-
2
GCGTC
UKMR15_RS06645
1494382
1495773
-
Genic
-547
NZ_LR595896.1
1495141
1495154
ACCGCG
13
-
2
GTCGCG
UKMR15_RS06645
1494382
1495773
-
Genic
-759
NZ_LR595896.1
1495325
1495337
ACGCGC
12
-
2
GCGCGT
UKMR15_RS06645
1494382
1495773
-
Genic
-943
NZ_LR595896.1
1495536
1495548
AAGCCG
12
+
2
GAAGCC
UKMR15_RS06645
1494382
1495773
-
Genic
-1154
NZ_LR595896.1
1495953
1495967
AGATCG
14
+
2
CGAGAT
UKMR15_RS06650
1495781
1496098
-
Genic
-172
NZ_LR595896.1
1496697
1496711
ACGCCG
14
-
2
CGTCGG
UKMR15_RS06655
1496363
1497988
-
Genic
-334
NZ_LR595896.1
1497057
1497071
AGCGCG
14
+
2
CGAGCG
UKMR15_RS06655
1496363
1497988
-
Genic
-694
NZ_LR595896.1
1498643
1498656
AAATCG
13
-
2
TTTCGA
UKMR15_RS06670
1498344
1499045
-
Genic
-299
NZ_LR595896.1
1507614
1507626
AAGCCG
12
-
2
GCTTCG
UKMR15_RS06710
1506191
1507771
-
Genic
-1423
NZ_LR595896.1
1508513
1508526
AAAT
13
-
3
ATTT
UKMR15_RS06720
1508167
1508394
-
Intergenic
-346
NZ_LR595896.1
1509597
1509609
AATCCG
12
-
2
GATTCG
UKMR15_RS06725
1508772
1510145
-
Genic
-825
NZ_LR595896.1
1511055
1511067
ATCGCG
12
+
2
TCGCGA
UKMR15_RS06735
1510997
1511710
-
Genic
-58
NZ_LR595896.1
1519484
1519496
AACCTG
12
+
2
AACCTG
UKMR15_RS06775
1519191
1519568
+
Genic
-293
NZ_LR595896.1
1519709
1519723
ATCCCG
14
+
2
CGATCC
UKMR15_RS06780
1519841
1520170
+
Intergenic
118
NZ_LR595896.1
1520341
1520353
CCGCG
12
-
2
GCGGC
UKMR15_RS06780
1519841
1520170
+
Intergenic
-500
NZ_LR595896.1
1520647
1520659
ACGAG
12
-
2
CGTCT
UKMR15_RS06780
1519841
1520170
+
Intergenic
-806
NZ_LR595896.1
1521117
1521130
AAGCG
13
-
2
CGCTT
UKMR15_RS06780
1519841
1520170
+
Intergenic
-1276
NZ_LR595896.1
1521372
1521384
CG
12
+
6
CG
UKMR15_RS06780
1519841
1520170
+
Intergenic
-1531
NZ_LR595896.1
1521408
1521420
ACCGCC
12
-
2
GTGGCG
UKMR15_RS06780
1519841
1520170
+
Intergenic
-1567
NZ_LR595896.1
1521440
1521452
CCG
12
+
4
CCG
UKMR15_RS06780
1519841
1520170
+
Intergenic
-1599
NZ_LR595896.1
1522018
1522030
CCGCG
12
-
2
GCGGC
malQ
1523164
1525386
-
Intergenic
1134
NZ_LR595896.1
1522881
1522893
ACGCCC
12
+
2
CGCCCA
malQ
1523164
1525386
-
Intergenic
271
NZ_LR595896.1
1523055
1523067
ACAGAT
12
+
2
ACAGAT
malQ
1523164
1525386
-
Intergenic
97
NZ_LR595896.1
1523201
1523213
ACGCGC
12
-
2
TGCGCG
malQ
1523164
1525386
-
Genic
-37