Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2276 to 2300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1476439
1476453
AAGGTG
14
+
2
GAAGGT
pstS
1475457
1476485
+
Genic
-982
NZ_LR595896.1
1477113
1477128
ATCGGC
15
+
2
ATCGGC
pstC
1476592
1477578
+
Genic
-521
NZ_LR595896.1
1477151
1477163
ATCATG
12
+
2
GATCAT
pstC
1476592
1477578
+
Genic
-559
NZ_LR595896.1
1477314
1477327
AGGCCG
13
-
2
CTCGGC
pstC
1476592
1477578
+
Genic
-722
NZ_LR595896.1
1477749
1477761
ACGCCG
12
-
2
TCGGCG
pstA
1477575
1478468
+
Genic
-174
NZ_LR595896.1
1478058
1478071
AGCGCG
13
-
2
TCGCGC
pstA
1477575
1478468
+
Genic
-483
NZ_LR595896.1
1479171
1479183
ACGATG
12
-
2
TCGTCA
pstB
1478484
1479332
+
Genic
-687
NZ_LR595896.1
1481463
1481475
ATCGC
12
-
2
CGATG
phoR
1480856
1482166
+
Genic
-607
NZ_LR595896.1
1481642
1481654
ACGAGC
12
-
2
TGCTCG
phoR
1480856
1482166
+
Genic
-786
NZ_LR595896.1
1482025
1482038
AGCCCG
13
-
2
GGGCTC
phoR
1480856
1482166
+
Genic
-1169
NZ_LR595896.1
1482317
1482329
CCGCG
12
-
2
GCGGC
ppk1
1482367
1484427
-
Intergenic
38
NZ_LR595896.1
1482420
1482432
CCG
12
-
4
GCG
ppk1
1482367
1484427
-
Genic
-53
NZ_LR595896.1
1483292
1483304
ACCGGC
12
-
2
CGGTGC
ppk1
1482367
1484427
-
Genic
-925
NZ_LR595896.1
1483704
1483716
AAGACG
12
-
2
TTCGTC
ppk1
1482367
1484427
-
Genic
-1337
NZ_LR595896.1
1486558
1486570
AAACGG
12
+
2
GAAACG
UKMR15_RS06590
1486530
1486973
-
Genic
-28
NZ_LR595896.1
1487059
1487072
CCGCGG
13
+
2
CGCGGC
UKMR15_RS06590
1486530
1486973
-
Intergenic
-529
NZ_LR595896.1
1487234
1487247
AGGGCG
13
+
2
GGGCGA
UKMR15_RS06595
1487488
1488561
+
Intergenic
241
NZ_LR595896.1
1487642
1487656
ACGGCC
14
-
2
CGTGGC
UKMR15_RS06595
1487488
1488561
+
Genic
-154
NZ_LR595896.1
1487950
1487962
AACGCG
12
-
2
TCGCGT
UKMR15_RS06595
1487488
1488561
+
Genic
-462
NZ_LR595896.1
1488334
1488346
ACGCCG
12
+
2
CGACGC
UKMR15_RS06595
1487488
1488561
+
Genic
-846
NZ_LR595896.1
1488465
1488477
CCGCGG
12
+
2
CGGCCG
UKMR15_RS06595
1487488
1488561
+
Genic
-977
NZ_LR595896.1
1489266
1489279
CCGCG
13
-
2
CGGCG
UKMR15_RS06600
1488683
1489252
+
Intergenic
-583
NZ_LR595896.1
1489505
1489518
CCCCGG
13
-
2
CGGGGC
UKMR15_RS06605
1489673
1489930
-
Intergenic
155
NZ_LR595896.1
1491860
1491873
AAGCCG
13
+
2
GCCGAA
sixA
1491837
1492295
+
Genic
-23
NZ_LR595896.1
1492121
1492134
ACG
13
-
4
GTC
sixA
1491837
1492295
+
Genic
-284