Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2226 to 2250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1443967
1443982
AGCGCG
15
-
2
CGCGCT
mdcE
1443816
1444541
+
Genic
-151
NZ_LR595896.1
1444565
1444579
ACGCGC
14
-
2
CGTGCG
mdcG
1444516
1445442
+
Genic
-49
NZ_LR595896.1
1444713
1444726
AGCGGC
13
-
2
CTGCCG
mdcG
1444516
1445442
+
Genic
-197
NZ_LR595896.1
1445039
1445054
ACACCG
15
-
2
GTCGGT
mdcG
1444516
1445442
+
Genic
-523
NZ_LR595896.1
1445233
1445248
ACGCG
15
+
3
CGCGA
mdcG
1444516
1445442
+
Genic
-717
NZ_LR595896.1
1445279
1445291
ATCGGC
12
-
2
CGATGC
mdcG
1444516
1445442
+
Genic
-763
NZ_LR595896.1
1445499
1445511
CCCGCG
12
-
2
GGGCGC
mdcB
1445439
1446698
+
Genic
-60
NZ_LR595896.1
1445755
1445785
ACCGCG
30
+
5
GACCGC
mdcB
1445439
1446698
+
Genic
-316
NZ_LR595896.1
1445825
1445837
AACATC
12
+
2
TCAACA
mdcB
1445439
1446698
+
Genic
-386
NZ_LR595896.1
1446135
1446148
AGCCCG
13
-
2
TCGGGC
mdcB
1445439
1446698
+
Genic
-696
NZ_LR595896.1
1446571
1446584
CG
13
+
6
GC
mdcB
1445439
1446698
+
Genic
-1132
NZ_LR595896.1
1447033
1447045
CG
12
+
6
CG
mdcH
1446695
1447633
+
Genic
-338
NZ_LR595896.1
1447216
1447229
CG
13
+
6
GC
mdcH
1446695
1447633
+
Genic
-521
NZ_LR595896.1
1447258
1447271
ACGCG
13
-
2
CGCGT
mdcH
1446695
1447633
+
Genic
-563
NZ_LR595896.1
1447854
1447868
ACGCCG
14
+
2
CGACGC
UKMR15_RS06425
1447787
1448272
+
Genic
-67
NZ_LR595896.1
1447974
1447986
CCCGCG
12
-
2
GCGCGG
UKMR15_RS06425
1447787
1448272
+
Genic
-187
NZ_LR595896.1
1448111
1448123
ACG
12
-
4
TCG
UKMR15_RS06425
1447787
1448272
+
Genic
-324
NZ_LR595896.1
1449250
1449262
ACGGCC
12
-
2
TGGCCG
UKMR15_RS06435
1448801
1449682
+
Genic
-449
NZ_LR595896.1
1449687
1449702
AGCGCG
15
-
2
CGCTCG
UKMR15_RS06435
1448801
1449682
+
Intergenic
-886
NZ_LR595896.1
1450417
1450429
AGCGCG
12
-
2
CTCGCG
UKMR15_RS06440
1450130
1450759
+
Genic
-287
NZ_LR595896.1
1451522
1451534
ACACCG
12
+
2
CGACAC
proP
1451250
1452737
-
Genic
-272
NZ_LR595896.1
1451807
1451819
AGGATC
12
+
2
GATCAG
proP
1451250
1452737
-
Genic
-557
NZ_LR595896.1
1452394
1452406
ACGATG
12
-
2
TCATCG
proP
1451250
1452737
-
Genic
-1144
NZ_LR595896.1
1453437
1453451
CCGCGG
14
+
2
CGGCCG
UKMR15_RS06450
1453272
1453604
+
Genic
-165
NZ_LR595896.1
1453553
1453567
AGCGCG
14
-
2
GCGCTC
UKMR15_RS06450
1453272
1453604
+
Genic
-281