Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2176 to 2200 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1415857
1415869
ACGGCG
12
-
2
CGCCGT
UKMR15_RS06265
1415319
1415957
-
Genic
-538
NZ_LR595896.1
1416374
1416386
CCGCGG
12
+
2
CGCGGC
UKMR15_RS06270
1416079
1417620
+
Genic
-295
NZ_LR595896.1
1417569
1417581
CCCCGG
12
-
2
GCCGGG
UKMR15_RS06270
1416079
1417620
+
Genic
-1490
NZ_LR595896.1
1417579
1417593
ACGCCG
14
-
2
GGCGTC
UKMR15_RS06270
1416079
1417620
+
Genic
-1500
NZ_LR595896.1
1417649
1417761
AAGGCG
112
+
18
GAAGGC
UKMR15_RS06270
1416079
1417620
+
Intergenic
-1570
NZ_LR595896.1
1418495
1418507
AAATG
12
+
2
GAAAT
UKMR15_RS06275
1417958
1418452
-
Intergenic
-537
NZ_LR595896.1
1419236
1419248
ACGGCG
12
+
2
CGGCGA
glmS
1418611
1420512
+
Genic
-625
NZ_LR595896.1
1419928
1419943
AGCGCG
15
-
2
CGCTCG
glmS
1418611
1420512
+
Genic
-1317
NZ_LR595896.1
1420201
1420213
AGCGCG
12
-
2
CGCTCG
glmS
1418611
1420512
+
Genic
-1590
NZ_LR595896.1
1420681
1420699
AGCCG
18
-
3
TCGGC
UKMR15_RS06285
1420722
1422053
-
Intergenic
23
NZ_LR595896.1
1420701
1420714
CCGCG
13
-
2
GCGCG
UKMR15_RS06285
1420722
1422053
-
Intergenic
8
NZ_LR595896.1
1421640
1421652
CCGCG
12
+
2
CGCGC
UKMR15_RS06285
1420722
1422053
-
Genic
-918
NZ_LR595896.1
1422062
1422074
CCCCG
12
-
2
CGGGG
UKMR15_RS06290
1422075
1422776
-
Intergenic
1
NZ_LR595896.1
1422113
1422129
AGCGCG
16
+
2
CGCGAG
UKMR15_RS06290
1422075
1422776
-
Genic
-38
NZ_LR595896.1
1422422
1422437
CCGCGG
15
+
2
GCGGCC
UKMR15_RS06290
1422075
1422776
-
Genic
-347
NZ_LR595896.1
1422604
1422617
ACATCG
13
-
2
TGTCGA
UKMR15_RS06290
1422075
1422776
-
Genic
-529
NZ_LR595896.1
1423036
1423049
ATCGGC
13
+
2
CATCGG
UKMR15_RS06295
1422944
1423843
-
Genic
-92
NZ_LR595896.1
1424653
1424666
CCCGGG
13
+
2
GGGCCC
UKMR15_RS06300
1424094
1424867
+
Genic
-559
NZ_LR595896.1
1425556
1425572
ACTCCG
16
-
2
GGAGTC
UKMR15_RS06305
1425085
1426491
-
Genic
-471
NZ_LR595896.1
1426068
1426080
ACAGCG
12
+
2
CAGCGA
UKMR15_RS06305
1425085
1426491
-
Genic
-983
NZ_LR595896.1
1426907
1426919
CCGCG
12
+
2
GCCGC
UKMR15_RS06315
1426928
1427335
-
Intergenic
9
NZ_LR595896.1
1427294
1427306
AGCGCG
12
-
2
GCGCTC
UKMR15_RS06315
1426928
1427335
-
Genic
-366
NZ_LR595896.1
1429422
1429452
ACTCGG
30
-
5
CGAGTC
UKMR15_RS06325
1429672
1429860
+
Intergenic
220
NZ_LR595896.1
1429447
1429464
ACTCAG
17
-
2
GAGTCT
UKMR15_RS06325
1429672
1429860
+
Intergenic
208
NZ_LR595896.1
1429462
1429476
AATCG
14
+
2
TCGAA
UKMR15_RS06325
1429672
1429860
+
Intergenic
196