Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2201 to 2225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1429473
1429491
ACGAG
18
+
3
CGAGA
UKMR15_RS06325
1429672
1429860
+
Intergenic
181
NZ_LR595896.1
1429506
1429519
AACCCC
13
+
2
CCAACC
UKMR15_RS06325
1429672
1429860
+
Intergenic
153
NZ_LR595896.1
1430671
1430684
ACCTCG
13
-
2
GTCGAG
UKMR15_RS06330
1429937
1431412
-
Genic
-734
NZ_LR595896.1
1431783
1431798
ATGCCC
15
-
2
GGCATG
UKMR15_RS06335
1431831
1432121
+
Intergenic
33
NZ_LR595896.1
1431802
1431825
ATCGC
23
-
4
GCGAT
UKMR15_RS06335
1431831
1432121
+
Intergenic
6
NZ_LR595896.1
1431841
1431854
ACCGC
13
-
2
TGCGG
UKMR15_RS06335
1431831
1432121
+
Genic
-10
NZ_LR595896.1
1433774
1433788
CCGCG
14
-
2
GGCGC
UKMR15_RS06350
1433179
1433625
-
Intergenic
-595
NZ_LR595896.1
1433837
1433854
AAAGTC
17
+
2
AAGTCA
UKMR15_RS06350
1433179
1433625
-
Intergenic
-658
NZ_LR595896.1
1433850
1433890
ACTCGG
40
-
6
AGTCCG
UKMR15_RS06350
1433179
1433625
-
Intergenic
-671
NZ_LR595896.1
1433900
1433929
AAACCG
29
+
4
CCGAAA
UKMR15_RS06350
1433179
1433625
-
Intergenic
-721
NZ_LR595896.1
1434350
1434364
CCCGCG
14
-
2
GCGCGG
UKMR15_RS06355
1434652
1436517
+
Intergenic
288
NZ_LR595896.1
1434375
1434387
AGCGC
12
+
2
GCAGC
UKMR15_RS06355
1434652
1436517
+
Intergenic
265
NZ_LR595896.1
1434609
1434621
ACGC
12
+
3
CGCA
UKMR15_RS06355
1434652
1436517
+
Intergenic
31
NZ_LR595896.1
1435253
1435265
ACGGCC
12
-
2
GCCGTG
UKMR15_RS06355
1434652
1436517
+
Genic
-601
NZ_LR595896.1
1437837
1437849
CCGCG
12
-
2
GCGCG
UKMR15_RS06360
1436813
1437730
+
Intergenic
-1024
NZ_LR595896.1
1438335
1438348
AGCGCG
13
+
2
CGAGCG
UKMR15_RS06370
1438301
1439161
-
Genic
-34
NZ_LR595896.1
1438503
1438515
ACGAGC
12
-
2
TGCTCG
UKMR15_RS06370
1438301
1439161
-
Genic
-202
NZ_LR595896.1
1439102
1439114
ACGGCG
12
+
2
GCGACG
UKMR15_RS06370
1438301
1439161
-
Genic
-801
NZ_LR595896.1
1439957
1439970
ATCGCG
13
+
2
GCGATC
madM
1439829
1440596
+
Genic
-128
NZ_LR595896.1
1439978
1439990
AGCGCG
12
-
2
CTCGCG
madM
1439829
1440596
+
Genic
-149
NZ_LR595896.1
1440953
1440965
CCG
12
+
4
CGC
mdcA
1440910
1442556
+
Genic
-43
NZ_LR595896.1
1441355
1441369
ACGCCG
14
+
2
CGCCGA
mdcA
1440910
1442556
+
Genic
-445
NZ_LR595896.1
1442369
1442383
CCGCGG
14
+
2
CGGCCG
mdcA
1440910
1442556
+
Genic
-1459
NZ_LR595896.1
1442595
1442611
CG
16
+
8
CG
UKMR15_RS06395
1442570
1442887
+
Genic
-25
NZ_LR595896.1
1443370
1443382
CCG
12
-
4
CGG
mdcE
1443816
1444541
+
Intergenic
434