Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2151 to 2175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1391370
1391382
AGCGCG
12
+
2
GCGCGA
UKMR15_RS06105
1390793
1391821
-
Genic
-577
NZ_LR595896.1
1392076
1392088
AGCGGC
12
+
2
GCAGCG
UKMR15_RS06105
1390793
1391821
-
Intergenic
-1283
NZ_LR595896.1
1392542
1392557
AGCCGC
15
-
2
GCGGCT
UKMR15_RS06115
1393180
1393470
+
Intergenic
623
NZ_LR595896.1
1393650
1393662
AACGAT
12
+
2
AACGAT
UKMR15_RS06120
1393646
1393849
+
Genic
-4
NZ_LR595896.1
1395980
1395992
ACGCGC
12
-
2
TGCGCG
UKMR15_RS06130
1395044
1396105
-
Genic
-936
NZ_LR595896.1
1396144
1396156
AAAGCG
12
+
2
GAAAGC
UKMR15_RS06135
1396162
1397178
-
Intergenic
6
NZ_LR595896.1
1396528
1396540
AGCTCG
12
+
2
TCGAGC
UKMR15_RS06135
1396162
1397178
-
Genic
-366
NZ_LR595896.1
1396686
1396698
CCGCG
12
-
2
CGCGG
UKMR15_RS06135
1396162
1397178
-
Genic
-524
NZ_LR595896.1
1396792
1396807
ACGCCG
15
-
2
GCGTCG
UKMR15_RS06135
1396162
1397178
-
Genic
-630
NZ_LR595896.1
1397458
1397470
ATCCGC
12
-
2
GCGGAT
UKMR15_RS06140
1397749
1398249
+
Intergenic
279
NZ_LR595896.1
1401180
1401192
AGCGGC
12
-
2
CTGCCG
UKMR15_RS06175
1400824
1401525
-
Genic
-356
NZ_LR595896.1
1401498
1401510
AACTTC
12
+
2
CTTCAA
UKMR15_RS06175
1400824
1401525
-
Genic
-674
NZ_LR595896.1
1401536
1401549
AAGCGC
13
-
2
CTTGCG
UKMR15_RS06180
1401525
1402160
-
Genic
-11
NZ_LR595896.1
1406224
1406236
ACGATG
12
+
2
TGACGA
UKMR15_RS06230
1406079
1406366
-
Genic
-145
NZ_LR595896.1
1406563
1406575
AGCCG
12
+
2
AGCCG
UKMR15_RS06235
1406450
1407664
-
Genic
-113
NZ_LR595896.1
1408546
1408561
AACCGC
15
-
2
GCGGTT
UKMR15_RS06240
1408834
1409289
-
Intergenic
273
NZ_LR595896.1
1409686
1409698
AAGTCG
12
+
2
TCGAAG
UKMR15_RS06245
1409859
1411013
-
Intergenic
161
NZ_LR595896.1
1410204
1410218
ATCGCG
14
+
2
ATCGCG
UKMR15_RS06245
1409859
1411013
-
Genic
-345
NZ_LR595896.1
1410538
1410551
ACCGCG
13
+
2
CCGCGA
UKMR15_RS06245
1409859
1411013
-
Genic
-679
NZ_LR595896.1
1411505
1411517
ACCGTG
12
-
2
TCACGG
UKMR15_RS06250
1411387
1412787
-
Genic
-118
NZ_LR595896.1
1413126
1413138
CCGGCG
12
+
2
CGCCGG
UKMR15_RS06255
1413464
1414066
+
Intergenic
326
NZ_LR595896.1
1413286
1413298
ACGC
12
+
3
CGCA
UKMR15_RS06255
1413464
1414066
+
Intergenic
166
NZ_LR595896.1
1413601
1413614
ACGTCC
13
-
2
GACGTG
UKMR15_RS06255
1413464
1414066
+
Genic
-137
NZ_LR595896.1
1414134
1414146
CCGCG
12
+
2
CGCCG
UKMR15_RS06260
1414119
1414916
+
Genic
-15
NZ_LR595896.1
1414923
1414936
CCG
13
+
4
CGC
UKMR15_RS06260
1414119
1414916
+
Intergenic
-804