Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2351 to 2375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1538975
1538987
CCGG
12
+
3
GCCG
UKMR15_RS06820
1539005
1540483
-
Intergenic
18
NZ_LR595896.1
1539307
1539319
ACGTCG
12
+
2
CGTCGA
UKMR15_RS06820
1539005
1540483
-
Genic
-302
NZ_LR595896.1
1539907
1539920
ATCGGC
13
-
2
GATGCC
UKMR15_RS06820
1539005
1540483
-
Genic
-902
NZ_LR595896.1
1540250
1540262
ACGAGC
12
+
2
ACGAGC
UKMR15_RS06820
1539005
1540483
-
Genic
-1245
NZ_LR595896.1
1541042
1541080
CCCGG
38
-
7
GGCCG
UKMR15_RS06825
1541225
1541443
-
Intergenic
145
NZ_LR595896.1
1542096
1542117
ACAGCG
21
-
3
TCGCTG
UKMR15_RS06830
1541931
1542425
-
Genic
-165
NZ_LR595896.1
1542128
1542141
ATCGCC
13
+
2
GCCATC
UKMR15_RS06830
1541931
1542425
-
Genic
-197
NZ_LR595896.1
1542143
1542155
AGCGAT
12
-
2
ATCGCT
UKMR15_RS06830
1541931
1542425
-
Genic
-212
NZ_LR595896.1
1545074
1545086
AACGCG
12
-
2
TCGCGT
UKMR15_RS06845
1544729
1545706
+
Genic
-345
NZ_LR595896.1
1546049
1546062
AATCCC
13
-
2
TGGGAT
UKMR15_RS06850
1546120
1546902
+
Intergenic
58
NZ_LR595896.1
1546989
1547003
CCGCG
14
-
2
CGCGG
UKMR15_RS06855
1547085
1547300
+
Intergenic
82
NZ_LR595896.1
1547348
1547361
AATCGC
13
-
2
GATTGC
UKMR15_RS06860
1547311
1547682
+
Genic
-37
NZ_LR595896.1
1547366
1547378
ACGCGC
12
+
2
CGCGCA
UKMR15_RS06860
1547311
1547682
+
Genic
-55
NZ_LR595896.1
1550120
1550134
ATCGCG
14
+
2
CGCGAT
UKMR15_RS06880
1549756
1553028
+
Genic
-364
NZ_LR595896.1
1550135
1550147
AACACG
12
+
2
CACGAA
UKMR15_RS06880
1549756
1553028
+
Genic
-379
NZ_LR595896.1
1550187
1550202
CCGGCG
15
+
2
GGCGCC
UKMR15_RS06880
1549756
1553028
+
Genic
-431
NZ_LR595896.1
1550375
1550387
ACCGGG
12
+
2
GACCGG
UKMR15_RS06880
1549756
1553028
+
Genic
-619
NZ_LR595896.1
1550834
1550848
ATCGCG
14
+
2
CGCGAT
UKMR15_RS06880
1549756
1553028
+
Genic
-1078
NZ_LR595896.1
1552857
1552869
AAGGAC
12
+
2
GACAAG
UKMR15_RS06880
1549756
1553028
+
Genic
-3101
NZ_LR595896.1
1553304
1553316
ACGTGC
12
+
2
ACGTGC
UKMR15_RS06885
1553109
1553819
+
Genic
-195
NZ_LR595896.1
1553401
1553414
AGCCGC
13
+
2
GCAGCC
UKMR15_RS06885
1553109
1553819
+
Genic
-292
NZ_LR595896.1
1553922
1553938
AGCGCG
16
-
2
GCGCTC
UKMR15_RS06890
1553821
1555350
+
Genic
-101
NZ_LR595896.1
1553945
1553957
AGCGCG
12
-
2
CGCGCT
UKMR15_RS06890
1553821
1555350
+
Genic
-124
NZ_LR595896.1
1554230
1554243
AGGCGC
13
+
2
GCAGGC
UKMR15_RS06890
1553821
1555350
+
Genic
-409
NZ_LR595896.1
1555435
1555447
AAGGCG
12
+
2
AAGGCG
UKMR15_RS06895
1555367
1555711
+
Genic
-68