Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 276 to 300 repeats of 10659
Go To:
<<
<
10
11
12
13
14
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
184567
184581
AGCGCG
14
-
2
GCGCTC
UKMR15_RS00860
183434
184621
+
Genic
-1133
NZ_LR595896.1
184888
184900
AGCCGC
12
+
2
CGCAGC
UKMR15_RS00865
184789
185142
-
Genic
-99
NZ_LR595896.1
186384
186398
AGCGC
14
-
2
TGCGC
UKMR15_RS00870
185386
186279
+
Intergenic
-998
NZ_LR595896.1
186529
186541
AAACG
12
-
2
CGTTT
UKMR15_RS00875
186562
186768
-
Intergenic
21
NZ_LR595896.1
186834
186846
CCGCG
12
-
2
CGCGG
UKMR15_RS00875
186562
186768
-
Intergenic
-272
NZ_LR595896.1
187585
187597
AGCCCG
12
-
2
CGGGCT
mgrA
186943
187986
+
Genic
-642
NZ_LR595896.1
188549
188561
AGCGCG
12
+
2
CGCGAG
UKMR15_RS00890
188526
189389
-
Genic
-23
NZ_LR595896.1
188861
188873
CCGCG
12
-
2
CGGCG
UKMR15_RS00890
188526
189389
-
Genic
-335
NZ_LR595896.1
188997
189011
AGCGCG
14
+
2
AGCGCG
UKMR15_RS00890
188526
189389
-
Genic
-471
NZ_LR595896.1
189485
189498
AGAGCG
13
+
2
GAGAGC
UKMR15_RS00895
189511
189747
-
Intergenic
13
NZ_LR595896.1
190090
190104
CCGCGG
14
+
2
CGCGGC
UKMR15_RS00900
189744
191033
-
Genic
-346
NZ_LR595896.1
190993
191005
CCG
12
-
4
CGG
UKMR15_RS00900
189744
191033
-
Genic
-1249
NZ_LR595896.1
192216
192229
AGCGCG
13
-
2
TCGCGC
UKMR15_RS00910
191640
192671
+
Genic
-576
NZ_LR595896.1
192782
192794
CCGGCG
12
+
2
CGGCGC
UKMR15_RS00910
191640
192671
+
Intergenic
-1142
NZ_LR595896.1
192794
192816
AACGCG
22
-
3
TCGCGT
UKMR15_RS00910
191640
192671
+
Intergenic
-1154
NZ_LR595896.1
192873
192885
AGGGCG
12
-
2
CCTCGC
UKMR15_RS00910
191640
192671
+
Intergenic
-1233
NZ_LR595896.1
193632
193647
CCGCGG
15
+
2
GCGGCC
UKMR15_RS00920
193340
194758
-
Genic
-292
NZ_LR595896.1
193934
193952
CG
18
+
9
CG
UKMR15_RS00920
193340
194758
-
Genic
-594
NZ_LR595896.1
195838
195850
CCCGCG
12
+
2
GCCCGC
UKMR15_RS00925
194793
196472
-
Genic
-1045
NZ_LR595896.1
195914
195926
ATGCCC
12
+
2
CATGCC
UKMR15_RS00925
194793
196472
-
Genic
-1121
NZ_LR595896.1
196284
196296
AGCGCG
12
+
2
GCGAGC
UKMR15_RS00925
194793
196472
-
Genic
-1491
NZ_LR595896.1
196947
196959
CCGCGG
12
+
2
CCGCGG
UKMR15_RS00930
196706
198349
+
Genic
-241
NZ_LR595896.1
197047
197059
AGCCCC
12
-
2
GGCTGG
UKMR15_RS00930
196706
198349
+
Genic
-341
NZ_LR595896.1
197999
198011
CCGCG
12
+
2
GCGCC
UKMR15_RS00930
196706
198349
+
Genic
-1293
NZ_LR595896.1
198492
198506
ACGCG
14
-
2
CGCGT
UKMR15_RS00935
198389
199789
-
Genic
-103