Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 301 to 325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
199332
199345
CCCGCG
13
+
2
CGCCCG
UKMR15_RS00935
198389
199789
-
Genic
-943
NZ_LR595896.1
199420
199432
CCGCGG
12
+
2
CGCGGC
UKMR15_RS00935
198389
199789
-
Genic
-1031
NZ_LR595896.1
199539
199551
CCCGCG
12
+
2
CGCCCG
UKMR15_RS00935
198389
199789
-
Genic
-1150
NZ_LR595896.1
200160
200172
AGGCGC
12
-
2
CTGCGC
fliJ
199822
200274
-
Genic
-338
NZ_LR595896.1
200550
200562
ACATCG
12
-
2
TCGATG
fliI
200280
201851
-
Genic
-270
NZ_LR595896.1
201037
201050
ACGATC
13
+
2
CGATCA
fliI
200280
201851
-
Genic
-757
NZ_LR595896.1
201586
201598
AGCGGC
12
+
2
GCAGCG
fliI
200280
201851
-
Genic
-1306
NZ_LR595896.1
201777
201789
AGCGCG
12
+
2
GCGAGC
fliI
200280
201851
-
Genic
-1497
NZ_LR595896.1
202158
202170
AGCGCG
12
+
2
CGAGCG
fliH
201845
202525
-
Genic
-313
NZ_LR595896.1
202433
202450
CCG
17
-
5
GGC
fliH
201845
202525
-
Genic
-588
NZ_LR595896.1
202807
202819
AACACG
12
+
2
CGAACA
fliG
202518
203513
-
Genic
-289
NZ_LR595896.1
203897
203909
CCGCGG
12
+
2
CGGCCG
fliF
203503
205299
-
Genic
-394
NZ_LR595896.1
204665
204677
ACGCCG
12
+
2
CCGACG
fliF
203503
205299
-
Genic
-1162
NZ_LR595896.1
205216
205230
CCGCGG
14
+
2
GCCGCG
fliF
203503
205299
-
Genic
-1713
NZ_LR595896.1
207543
207555
AGCGGC
12
-
2
TGCCGC
UKMR15_RS00980
206889
208391
+
Genic
-654
NZ_LR595896.1
207701
207714
ACGCCG
13
+
2
GCCGAC
UKMR15_RS00980
206889
208391
+
Genic
-812
NZ_LR595896.1
208088
208101
CCGCG
13
-
2
GGCGC
UKMR15_RS00980
206889
208391
+
Genic
-1199
NZ_LR595896.1
208340
208352
ACG
12
-
4
TCG
UKMR15_RS00980
206889
208391
+
Genic
-1451
NZ_LR595896.1
209017
209029
CCG
12
+
4
CGC
UKMR15_RS00990
208925
209644
+
Genic
-92
NZ_LR595896.1
209207
209221
CCCGCG
14
+
2
CGCCCG
UKMR15_RS00990
208925
209644
+
Genic
-282
NZ_LR595896.1
209673
209685
CCGG
12
+
3
GCCG
UKMR15_RS00990
208925
209644
+
Intergenic
-748
NZ_LR595896.1
210321
210338
AGCGCG
17
-
2
TCGCGC
UKMR15_RS00995
209732
210757
-
Genic
-589
NZ_LR595896.1
210355
210369
AGCGCG
14
+
2
CGCGAG
UKMR15_RS00995
209732
210757
-
Genic
-623
NZ_LR595896.1
210879
210891
ACGCC
12
-
2
GCGTG
UKMR15_RS01000
210956
212359
-
Intergenic
65
NZ_LR595896.1
211545
211558
ACCGCG
13
+
2
CCGCGA
UKMR15_RS01000
210956
212359
-
Genic
-589