Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2976 to 3000 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1937074
1937087
AAGCCG
13
+
2
CGAAGC
UKMR15_RS08435
1936038
1937321
+
Genic
-1036
NZ_LR595896.1
1937191
1937206
CCGCG
15
-
3
GCGCG
UKMR15_RS08435
1936038
1937321
+
Genic
-1153
NZ_LR595896.1
1937833
1937845
ACAGCC
12
-
2
TGGCTG
UKMR15_RS08440
1937402
1938022
+
Genic
-431
NZ_LR595896.1
1937899
1937911
ACGATG
12
-
2
ATCGTC
UKMR15_RS08440
1937402
1938022
+
Genic
-497
NZ_LR595896.1
1938002
1938019
CCCCCG
17
-
2
GCGGGG
UKMR15_RS08440
1937402
1938022
+
Genic
-600
NZ_LR595896.1
1942498
1942511
AGGCCG
13
+
2
GGCCGA
cobJ
1941774
1943603
-
Genic
-724
NZ_LR595896.1
1942793
1942807
AGCGCG
14
+
2
CGCGAG
cobJ
1941774
1943603
-
Genic
-1019
NZ_LR595896.1
1942953
1942967
ATCGCC
14
+
2
CCATCG
cobJ
1941774
1943603
-
Genic
-1179
NZ_LR595896.1
1943332
1943344
ACGGCG
12
+
2
CGGCGA
cobJ
1941774
1943603
-
Genic
-1558
NZ_LR595896.1
1944361
1944373
CCGCGG
12
+
2
GCGGCC
UKMR15_RS08470
1944331
1944957
-
Genic
-30
NZ_LR595896.1
1944491
1944506
CCCCG
15
-
3
GGGCG
UKMR15_RS08470
1944331
1944957
-
Genic
-160
NZ_LR595896.1
1944779
1944793
CCCGCG
14
+
2
CGCCCG
UKMR15_RS08470
1944331
1944957
-
Genic
-448
NZ_LR595896.1
1945184
1945199
AGCGCG
15
+
2
GCGAGC
UKMR15_RS08470
1944331
1944957
-
Intergenic
-853
NZ_LR595896.1
1946142
1946154
AGCGCG
12
-
2
GCTCGC
UKMR15_RS08480
1946795
1948021
+
Intergenic
641
NZ_LR595896.1
1946643
1946656
CCGCG
13
-
2
GCGGC
UKMR15_RS08480
1946795
1948021
+
Intergenic
139
NZ_LR595896.1
1946855
1946867
CCGCG
12
-
2
CGGCG
UKMR15_RS08480
1946795
1948021
+
Genic
-60
NZ_LR595896.1
1947035
1947047
ACGCCG
12
-
2
TCGGCG
UKMR15_RS08480
1946795
1948021
+
Genic
-240
NZ_LR595896.1
1947102
1947114
ACAGCG
12
-
2
GTCGCT
UKMR15_RS08480
1946795
1948021
+
Genic
-307
NZ_LR595896.1
1947504
1947521
AGCGCG
17
-
2
CGCGCT
UKMR15_RS08480
1946795
1948021
+
Genic
-709
NZ_LR595896.1
1947525
1947537
CCCGCG
12
+
2
CGCGCC
UKMR15_RS08480
1946795
1948021
+
Genic
-730
NZ_LR595896.1
1947617
1947629
ATCGCG
12
+
2
CGATCG
UKMR15_RS08480
1946795
1948021
+
Genic
-822
NZ_LR595896.1
1947915
1947927
ACGCGC
12
+
2
CGCGCA
UKMR15_RS08480
1946795
1948021
+
Genic
-1120
NZ_LR595896.1
1948081
1948093
AGCGCG
12
+
2
GCGCGA
UKMR15_RS08485
1948018
1949112
+
Genic
-63
NZ_LR595896.1
1948965
1948981
AGCGCG
16
-
2
GCGCTC
UKMR15_RS08485
1948018
1949112
+
Genic
-947
NZ_LR595896.1
1949410
1949423
CCGCGG
13
+
2
GCGGCC
UKMR15_RS08490
1949109
1949843
+
Genic
-301