Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3001 to 3025 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1949651
1949663
CCG
12
-
4
GCG
UKMR15_RS08490
1949109
1949843
+
Genic
-542
NZ_LR595896.1
1950838
1950850
AGGATC
12
-
2
CTGATC
cobM
1950182
1950907
+
Genic
-656
NZ_LR595896.1
1951092
1951104
ACGTCG
12
+
2
CGACGT
UKMR15_RS08500
1950986
1952551
-
Genic
-106
NZ_LR595896.1
1951909
1951921
ACCCGT
12
-
2
CGGGTA
UKMR15_RS08500
1950986
1952551
-
Genic
-923
NZ_LR595896.1
1952166
1952178
ACGGCG
12
+
2
CGGCGA
UKMR15_RS08500
1950986
1952551
-
Genic
-1180
NZ_LR595896.1
1953336
1953348
CCGCGG
12
+
2
CGCGGC
UKMR15_RS08510
1953988
1954482
+
Intergenic
640
NZ_LR595896.1
1955843
1955856
ACGCGC
13
-
2
TGCGCG
UKMR15_RS08515
1954790
1955905
-
Genic
-1053
NZ_LR595896.1
1956714
1956726
CCG
12
+
4
GCC
UKMR15_RS08525
1957207
1957911
-
Intergenic
481
NZ_LR595896.1
1957131
1957143
CCGCG
12
-
2
CGCGG
UKMR15_RS08525
1957207
1957911
-
Intergenic
64
NZ_LR595896.1
1958123
1958135
CCCGCG
12
-
2
CGGGCG
UKMR15_RS08530
1958195
1959115
-
Intergenic
60
NZ_LR595896.1
1958389
1958403
CCCGCG
14
+
2
GCCCGC
UKMR15_RS08530
1958195
1959115
-
Genic
-194
NZ_LR595896.1
1958517
1958530
AAAGCG
13
+
2
GAAAGC
UKMR15_RS08530
1958195
1959115
-
Genic
-322
NZ_LR595896.1
1959028
1959040
CCG
12
+
4
CGC
UKMR15_RS08530
1958195
1959115
-
Genic
-833
NZ_LR595896.1
1959450
1959462
CCCGCG
12
-
2
CGGGCG
UKMR15_RS08535
1959213
1959662
+
Genic
-237
NZ_LR595896.1
1959876
1959889
ACGTCC
13
-
2
GGACGT
UKMR15_RS08540
1959659
1960453
+
Genic
-217
NZ_LR595896.1
1959900
1959914
CCCGCG
14
-
2
CGCGGG
UKMR15_RS08540
1959659
1960453
+
Genic
-241
NZ_LR595896.1
1960040
1960052
AACACG
12
-
2
TCGTGT
UKMR15_RS08540
1959659
1960453
+
Genic
-381
NZ_LR595896.1
1960373
1960385
CCG
12
+
4
CCG
UKMR15_RS08540
1959659
1960453
+
Genic
-714
NZ_LR595896.1
1960588
1960600
CCGCG
12
+
2
CGCCG
arcC
1960685
1961623
-
Intergenic
85
NZ_LR595896.1
1960659
1960671
CCGCGG
12
+
2
GCCGCG
arcC
1960685
1961623
-
Intergenic
14
NZ_LR595896.1
1961065
1961077
CCG
12
+
4
GCC
arcC
1960685
1961623
-
Genic
-380
NZ_LR595896.1
1961139
1961152
CCGCGG
13
+
2
GCCGCG
arcC
1960685
1961623
-
Genic
-454
NZ_LR595896.1
1962841
1962853
CCGCGG
12
+
2
CGGCCG
arcA
1962787
1964043
-
Genic
-54
NZ_LR595896.1
1963087
1963099
ACATCG
12
-
2
TCGATG
arcA
1962787
1964043
-
Genic
-300
NZ_LR595896.1
1964174
1964186
AAGGCG
12
-
2
CTTCGC
arcD
1964061
1965521
-
Genic
-113