Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3076 to 3100 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1993907
1993919
CCCG
12
-
3
CGGG
UKMR15_RS08685
1993114
1993998
+
Genic
-793
NZ_LR595896.1
1994001
1994013
CCCGCG
12
+
2
CCGCGC
UKMR15_RS08685
1993114
1993998
+
Intergenic
-887
NZ_LR595896.1
1994027
1994039
AAGCG
12
-
2
CGCTT
UKMR15_RS08690
1994052
1995284
+
Intergenic
13
NZ_LR595896.1
1994412
1994427
AGCGCG
15
-
2
TCGCGC
UKMR15_RS08690
1994052
1995284
+
Genic
-360
NZ_LR595896.1
1995223
1995239
ACGCGC
16
-
2
CGCGTG
UKMR15_RS08690
1994052
1995284
+
Genic
-1171
NZ_LR595896.1
1995674
1995686
CCGCG
12
-
2
GCGGC
UKMR15_RS08695
1995281
1995922
+
Genic
-393
NZ_LR595896.1
1997130
1997143
ACCGGC
13
+
2
CACCGG
UKMR15_RS08705
1997081
1999783
+
Genic
-49
NZ_LR595896.1
1997645
1997657
AGCGCG
12
-
2
TCGCGC
UKMR15_RS08705
1997081
1999783
+
Genic
-564
NZ_LR595896.1
1998925
1998946
CCCGCG
21
-
3
GGCGCG
UKMR15_RS08705
1997081
1999783
+
Genic
-1844
NZ_LR595896.1
1999059
1999074
ATCGCG
15
+
2
CGCGAT
UKMR15_RS08705
1997081
1999783
+
Genic
-1978
NZ_LR595896.1
1999704
1999717
CCGCG
13
+
2
GCGCC
UKMR15_RS08705
1997081
1999783
+
Genic
-2623
NZ_LR595896.1
1999765
1999779
CCG
14
-
4
GCG
UKMR15_RS08705
1997081
1999783
+
Genic
-2684
NZ_LR595896.1
2002023
2002035
ACG
12
-
4
TCG
UKMR15_RS08720
2001612
2020424
+
Genic
-411
NZ_LR595896.1
2003065
2003077
CCGCGG
12
+
2
CGCGGC
UKMR15_RS08720
2001612
2020424
+
Genic
-1453
NZ_LR595896.1
2003245
2003257
AGCGC
12
+
2
GCAGC
UKMR15_RS08720
2001612
2020424
+
Genic
-1633
NZ_LR595896.1
2003499
2003511
AGCGCG
12
-
2
CGCTCG
UKMR15_RS08720
2001612
2020424
+
Genic
-1887
NZ_LR595896.1
2003790
2003805
ACACCG
15
+
2
CCGACA
UKMR15_RS08720
2001612
2020424
+
Genic
-2178
NZ_LR595896.1
2003812
2003834
ACCTCG
22
+
3
CTCGAC
UKMR15_RS08720
2001612
2020424
+
Genic
-2200
NZ_LR595896.1
2004057
2004069
ACGCGC
12
+
2
ACGCGC
UKMR15_RS08720
2001612
2020424
+
Genic
-2445
NZ_LR595896.1
2004206
2004218
AGCGCC
12
-
2
GCGCTG
UKMR15_RS08720
2001612
2020424
+
Genic
-2594
NZ_LR595896.1
2004783
2004796
AGCGGC
13
-
2
CGCTGC
UKMR15_RS08720
2001612
2020424
+
Genic
-3171
NZ_LR595896.1
2004969
2004981
ACGCG
12
+
2
GCGAC
UKMR15_RS08720
2001612
2020424
+
Genic
-3357
NZ_LR595896.1
2005318
2005330
AGCGCG
12
-
2
CGCGCT
UKMR15_RS08720
2001612
2020424
+
Genic
-3706
NZ_LR595896.1
2005469
2005481
AGCGCG
12
-
2
CTCGCG
UKMR15_RS08720
2001612
2020424
+
Genic
-3857
NZ_LR595896.1
2006205
2006217
CCCGCG
12
+
2
CCGCGC
UKMR15_RS08720
2001612
2020424
+
Genic
-4593