Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3126 to 3150 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2018866
2018878
AGCGCG
12
+
2
CGAGCG
UKMR15_RS08720
2001612
2020424
+
Genic
-17254
NZ_LR595896.1
2019213
2019225
ACGCG
12
-
2
GCGTC
UKMR15_RS08720
2001612
2020424
+
Genic
-17601
NZ_LR595896.1
2019454
2019466
CCG
12
+
4
CGC
UKMR15_RS08720
2001612
2020424
+
Genic
-17842
NZ_LR595896.1
2021169
2021181
ACGGCG
12
+
2
ACGGCG
UKMR15_RS08725
2020515
2022236
+
Genic
-654
NZ_LR595896.1
2021349
2021361
ACGTCG
12
+
2
ACGTCG
UKMR15_RS08725
2020515
2022236
+
Genic
-834
NZ_LR595896.1
2022308
2022320
CCGCG
12
-
2
GCGGC
UKMR15_RS08730
2022361
2024733
+
Intergenic
41
NZ_LR595896.1
2023273
2023285
CCGCG
12
-
2
GCGGC
UKMR15_RS08730
2022361
2024733
+
Genic
-912
NZ_LR595896.1
2023411
2023423
ACGGCG
12
+
2
GCGACG
UKMR15_RS08730
2022361
2024733
+
Genic
-1050
NZ_LR595896.1
2023634
2023648
ACGTCG
14
+
2
CGTCGA
UKMR15_RS08730
2022361
2024733
+
Genic
-1273
NZ_LR595896.1
2024746
2024760
ACCGTG
14
+
2
CGTGAC
UKMR15_RS08730
2022361
2024733
+
Intergenic
-2385
NZ_LR595896.1
2026904
2026916
AAGGGC
12
-
2
TGCCCT
UKMR15_RS08750
2026532
2027443
+
Genic
-372
NZ_LR595896.1
2028535
2028547
AGGCCG
12
-
2
CTCGGC
UKMR15_RS08760
2028218
2028721
+
Genic
-317
NZ_LR595896.1
2029794
2029806
ACGCCG
12
+
2
GCCGAC
UKMR15_RS08770
2029447
2030088
-
Genic
-347
NZ_LR595896.1
2030712
2030725
AGCGCC
13
+
2
GCCAGC
UKMR15_RS08775
2030085
2030630
-
Intergenic
-627
NZ_LR595896.1
2032764
2032776
ACAGCG
12
-
2
GTCGCT
UKMR15_RS08795
2032384
2033664
-
Genic
-380
NZ_LR595896.1
2034799
2034812
CCG
13
+
4
CCG
UKMR15_RS08800
2033661
2035046
-
Genic
-1138
NZ_LR595896.1
2035848
2035860
ACCGGC
12
+
2
CCGGCA
UKMR15_RS08805
2035146
2036036
+
Genic
-702
NZ_LR595896.1
2036280
2036294
CCG
14
-
4
GCG
UKMR15_RS08810
2036217
2037308
+
Genic
-63
NZ_LR595896.1
2036854
2036868
AGCGCG
14
-
2
CGCGCT
UKMR15_RS08810
2036217
2037308
+
Genic
-637
NZ_LR595896.1
2037465
2037477
CCGCG
12
+
2
GCCGC
UKMR15_RS08815
2037327
2038967
+
Genic
-138
NZ_LR595896.1
2038559
2038571
AGCGCG
12
-
2
CTCGCG
UKMR15_RS08815
2037327
2038967
+
Genic
-1232
NZ_LR595896.1
2038769
2038781
CCG
12
-
4
GGC
UKMR15_RS08815
2037327
2038967
+
Genic
-1442
NZ_LR595896.1
2038984
2038996
ACAGG
12
+
2
GACAG
UKMR15_RS08820
2039004
2040326
+
Intergenic
8
NZ_LR595896.1
2040306
2040323
ACGCC
17
+
3
CCACG
UKMR15_RS08820
2039004
2040326
+
Genic
-1302
NZ_LR595896.1
2040571
2040583
ACGCCG
12
-
2
GTCGGC
UKMR15_RS08825
2040344
2041978
+
Genic
-227