Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3151 to 3175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2042699
2042712
CCG
13
+
4
CCG
UKMR15_RS08835
2042820
2043920
+
Intergenic
108
NZ_LR595896.1
2043106
2043120
ACGCCG
14
-
2
CGTCGG
UKMR15_RS08835
2042820
2043920
+
Genic
-286
NZ_LR595896.1
2043133
2043146
ACGCTC
13
+
2
CACGCT
UKMR15_RS08835
2042820
2043920
+
Genic
-313
NZ_LR595896.1
2043531
2043543
ACGCCG
12
-
2
TCGGCG
UKMR15_RS08835
2042820
2043920
+
Genic
-711
NZ_LR595896.1
2043586
2043599
AACACG
13
+
2
CACGAA
UKMR15_RS08835
2042820
2043920
+
Genic
-766
NZ_LR595896.1
2044948
2044960
ACAGCG
12
-
2
GTCGCT
UKMR15_RS08845
2044928
2046178
-
Genic
-20
NZ_LR595896.1
2047772
2047785
AATGGC
13
-
2
TTGCCA
UKMR15_RS08855
2046372
2047466
+
Intergenic
-1400
NZ_LR595896.1
2048911
2048923
ATCGCC
12
+
2
CCATCG
UKMR15_RS08870
2049557
2050270
-
Intergenic
634
NZ_LR595896.1
2051020
2051033
AAGCTG
13
+
2
GAAGCT
cysC
2051283
2051888
-
Intergenic
250
NZ_LR595896.1
2051478
2051491
ACTGCG
13
-
2
TCGCAG
cysC
2051283
2051888
-
Genic
-195
NZ_LR595896.1
2051956
2051968
AACGGC
12
+
2
CGGCAA
cysC
2051283
2051888
-
Intergenic
-673
NZ_LR595896.1
2056731
2056744
AGC
13
+
4
CAG
UKMR15_RS08890
2053831
2058186
-
Genic
-2900
NZ_LR595896.1
2057555
2057567
CCG
12
+
4
CCG
UKMR15_RS08890
2053831
2058186
-
Genic
-3724
NZ_LR595896.1
2058463
2058475
AACCTG
12
+
2
GAACCT
UKMR15_RS08895
2058306
2059715
-
Genic
-157
NZ_LR595896.1
2059096
2059108
AGGCGG
12
-
2
CCGCCT
UKMR15_RS08895
2058306
2059715
-
Genic
-790
NZ_LR595896.1
2062175
2062188
CG
13
+
6
CG
UKMR15_RS08905
2062038
2062913
-
Genic
-137
NZ_LR595896.1
2063922
2063937
AACGGC
15
-
2
GTTGCC
UKMR15_RS08910
2062910
2063419
-
Intergenic
-1012
NZ_LR595896.1
2064144
2064156
CCG
12
+
4
GCC
UKMR15_RS08910
2062910
2063419
-
Intergenic
-1234
NZ_LR595896.1
2066302
2066315
AACGTG
13
+
2
ACGTGA
UKMR15_RS08910
2062910
2063419
-
Intergenic
-3392
NZ_LR595896.1
2067016
2067029
CCCGCG
13
+
2
CGCCCG
UKMR15_RS08910
2062910
2063419
-
Intergenic
-4106
NZ_LR595896.1
2067044
2067058
ACGTCG
14
+
2
CGACGT
UKMR15_RS08910
2062910
2063419
-
Intergenic
-4134
NZ_LR595896.1
2067217
2067229
ACGCCG
12
-
2
GCGTCG
UKMR15_RS08910
2062910
2063419
-
Intergenic
-4307
NZ_LR595896.1
2067494
2067506
ACGGGC
12
-
2
CGTGCC
UKMR15_RS08910
2062910
2063419
-
Intergenic
-4584
NZ_LR595896.1
2067877
2067889
ACGCTC
12
+
2
TCACGC
UKMR15_RS08910
2062910
2063419
-
Intergenic
-4967
NZ_LR595896.1
2069960
2069972
ACGGGC
12
-
2
GCCCGT
UKMR15_RS08920
2073314
2075059
-
Intergenic
3342