Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3176 to 3200 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2070914
2070926
ACGGGC
12
-
2
GCCCGT
UKMR15_RS08920
2073314
2075059
-
Intergenic
2388
NZ_LR595896.1
2071652
2071665
CCGGCG
13
+
2
CGCCGG
UKMR15_RS08920
2073314
2075059
-
Intergenic
1649
NZ_LR595896.1
2072533
2072545
CCCGCG
12
+
2
CGCCCG
UKMR15_RS08920
2073314
2075059
-
Intergenic
769
NZ_LR595896.1
2073487
2073504
CCGGCG
17
+
2
CGCCGG
UKMR15_RS08920
2073314
2075059
-
Genic
-173
NZ_LR595896.1
2073779
2073792
CG
13
+
6
GC
UKMR15_RS08920
2073314
2075059
-
Genic
-465
NZ_LR595896.1
2074989
2075001
AGCGGC
12
+
2
GCGGCA
UKMR15_RS08920
2073314
2075059
-
Genic
-1675
NZ_LR595896.1
2080190
2080202
AATCG
12
-
2
ATTCG
UKMR15_RS08960
2080153
2081223
+
Genic
-37
NZ_LR595896.1
2082957
2082970
AACACG
13
-
2
CGTGTT
UKMR15_RS08970
2082155
2082949
-
Intergenic
-802
NZ_LR595896.1
2083092
2083105
ACGCCG
13
+
2
CGACGC
UKMR15_RS08970
2082155
2082949
-
Intergenic
-937
NZ_LR595896.1
2083215
2083228
CCGCG
13
+
2
CCGCG
UKMR15_RS08975
2083276
2086524
-
Intergenic
48
NZ_LR595896.1
2083234
2083246
CCCGCG
12
-
2
GCGGGC
UKMR15_RS08975
2083276
2086524
-
Intergenic
30
NZ_LR595896.1
2083260
2083273
CCCGCG
13
+
2
CCGCGC
UKMR15_RS08975
2083276
2086524
-
Intergenic
3
NZ_LR595896.1
2083807
2083819
ACATCG
12
-
2
ATGTCG
UKMR15_RS08975
2083276
2086524
-
Genic
-531
NZ_LR595896.1
2084207
2084220
ACGCGC
13
-
2
CGTGCG
UKMR15_RS08975
2083276
2086524
-
Genic
-931
NZ_LR595896.1
2084568
2084581
ATCGGC
13
-
2
GATGCC
UKMR15_RS08975
2083276
2086524
-
Genic
-1292
NZ_LR595896.1
2084698
2084710
ATCCG
12
-
2
CGGAT
UKMR15_RS08975
2083276
2086524
-
Genic
-1422
NZ_LR595896.1
2087268
2087280
AACGAT
12
+
2
AACGAT
UKMR15_RS08980
2086524
2087189
-
Intergenic
-744
NZ_LR595896.1
2087682
2087695
AGCGCG
13
-
2
CTCGCG
UKMR15_RS08985
2087476
2087859
-
Genic
-206
NZ_LR595896.1
2088534
2088546
CCGCG
12
-
2
CGCGG
UKMR15_RS08985
2087476
2087859
-
Intergenic
-1058
NZ_LR595896.1
2090024
2090037
ATCGGC
13
-
2
CCGATG
UKMR15_RS08995
2089294
2092923
-
Genic
-730
NZ_LR595896.1
2090055
2090069
CCCGCG
14
+
2
CGCGCC
UKMR15_RS08995
2089294
2092923
-
Genic
-761
NZ_LR595896.1
2090192
2090205
ATCGGC
13
-
2
CCGATG
UKMR15_RS08995
2089294
2092923
-
Genic
-898
NZ_LR595896.1
2090223
2090237
CCCGCG
14
+
2
CGCGCC
UKMR15_RS08995
2089294
2092923
-
Genic
-929
NZ_LR595896.1
2092079
2092091
ACGCG
12
+
2
GCGAC
UKMR15_RS08995
2089294
2092923
-
Genic
-2785
NZ_LR595896.1
2092344
2092356
ACGTCG
12
+
2
CGTCGA
UKMR15_RS08995
2089294
2092923
-
Genic
-3050