Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3226 to 3250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2116833
2116848
AGCGCG
15
+
2
AGCGCG
UKMR15_RS09100
2116557
2117297
-
Genic
-276
NZ_LR595896.1
2116903
2116915
CCGCG
12
-
2
GGCGC
UKMR15_RS09100
2116557
2117297
-
Genic
-346
NZ_LR595896.1
2116979
2116991
CCCGCG
12
+
2
CGCGCC
UKMR15_RS09100
2116557
2117297
-
Genic
-422
NZ_LR595896.1
2117315
2117327
CCGCG
12
-
2
CGCGG
UKMR15_RS09105
2117294
2118298
-
Genic
-21
NZ_LR595896.1
2117457
2117469
ACCGCG
12
+
2
CCGCGA
UKMR15_RS09105
2117294
2118298
-
Genic
-163
NZ_LR595896.1
2118358
2118371
CG
13
+
6
GC
UKMR15_RS09110
2118320
2119378
-
Genic
-38
NZ_LR595896.1
2119557
2119570
CCGCG
13
+
2
CGCCG
UKMR15_RS09110
2118320
2119378
-
Intergenic
-1237
NZ_LR595896.1
2120220
2120232
CCCGCG
12
-
2
GGCGCG
UKMR15_RS09115
2120044
2122026
+
Genic
-176
NZ_LR595896.1
2121026
2121038
ACGGGC
12
-
2
GCCCGT
UKMR15_RS09115
2120044
2122026
+
Genic
-982
NZ_LR595896.1
2123232
2123244
CCGCGG
12
+
2
CGCGGC
UKMR15_RS09120
2122207
2123457
+
Genic
-1025
NZ_LR595896.1
2124222
2124234
AACGCG
12
-
2
TCGCGT
UKMR15_RS09125
2123454
2124368
+
Genic
-768
NZ_LR595896.1
2124629
2124644
AGCGCG
15
+
2
GCGAGC
UKMR15_RS09130
2124365
2125201
+
Genic
-264
NZ_LR595896.1
2125247
2125259
CCG
12
+
4
CGC
UKMR15_RS09135
2125198
2125728
+
Genic
-49
NZ_LR595896.1
2126200
2126212
CCGCG
12
+
2
CCGCG
UKMR15_RS09145
2126011
2126415
+
Genic
-189
NZ_LR595896.1
2126527
2126540
CCG
13
+
4
CCG
UKMR15_RS09150
2126437
2126931
+
Genic
-90
NZ_LR595896.1
2127323
2127335
ACGCGC
12
-
2
GCGTGC
UKMR15_RS09155
2126990
2129122
+
Genic
-333
NZ_LR595896.1
2127908
2127920
AACGTG
12
-
2
CGTTCA
UKMR15_RS09155
2126990
2129122
+
Genic
-918
NZ_LR595896.1
2128461
2128473
ATCGCG
12
+
2
GATCGC
UKMR15_RS09155
2126990
2129122
+
Genic
-1471
NZ_LR595896.1
2128871
2128883
AAGCTC
12
+
2
TCAAGC
UKMR15_RS09155
2126990
2129122
+
Genic
-1881
NZ_LR595896.1
2128945
2128957
CCGG
12
+
3
CCGG
UKMR15_RS09155
2126990
2129122
+
Genic
-1955
NZ_LR595896.1
2129275
2129304
ATCCGC
29
+
4
GCATCC
UKMR15_RS09155
2126990
2129122
+
Intergenic
-2285
NZ_LR595896.1
2129398
2129410
CCGCG
12
+
2
CCGCG
UKMR15_RS09160
2129540
2131969
+
Intergenic
130
NZ_LR595896.1
2130677
2130690
ACG
13
-
4
TCG
UKMR15_RS09160
2129540
2131969
+
Genic
-1137
NZ_LR595896.1
2131987
2132000
AGCGCG
13
+
2
GAGCGC
UKMR15_RS09160
2129540
2131969
+
Intergenic
-2447
NZ_LR595896.1
2132929
2132941
CCGGCG
12
+
2
CGGCGC
UKMR15_RS09170
2132803
2133030
+
Genic
-126